iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044166

UUCD1 version

UUC-GlM-03154

Ensembl Protein ID

GLYMA11G19140.2

UniProt Accession

K7LQ71; K7LQ71_SOYBN

Protein Name

Protein HIRA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA11G19140	GLYMA11G19140.2	GLYMA11G19140.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-13	50.9	112	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH +   +l++ +d  +l+sGs D+ti++W+++ g ++
   Q: 112  GHVAYLVGLNWsPDdSTLASGSLDNTIHIWNMSNGICT 149
           78899999****77799**************9998886 PP

Organism

Glycine max

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

KIAEKPSWVR HEGMQIFSID VQPGGLRFAT GGGDHKVRIW NMKSVCGESG DIGNDESSQR 60
LLATLRDRFG SINCVRWAKH GRYRKSGLGT TKFGSGEPPN IEYWKVALTL RGHVAYLVGL 120

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Nucleotide Sequence
(Fasta)

AAGATCGCTG AGAAACCTAG CTGGGTTAGG CATGAGGGCA TGCAAATTTT CTCCATTGAT 60
GTTCAACCTG GTGGGCTCCG GTTTGCTACT GGTGGTGGTG ACCACAAGGT ATGGCTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000790--C:nuclear chromatin
GO:0031491--F:nucleosome binding
GO:0003714--F:transcription corepressor activity
GO:0016569--P:covalent chromatin modification
GO:0006336--P:DNA replication-independent nucleosome assembly
GO:0031935--P:regulation of chromatin silencing
GO:0006351--P:transcription, DNA-templated

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence