iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	87.64	0.00e+00	1063.00	IUUC-Hsa-045930
E3 activity/RING/RING	30.79	7.00e-68	253.00	IUUC-Sce-106396
E3 activity/RING/RING	32.06	6.00e-76	280.00	IUUC-Spo-108026

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cavia porcellus

Protein Sequence
(Fasta)

RRKITAQHIE SSDSDEIETI ELPQKIKGKL KNVQSENKSL KGMCMFSQYS DATFGFIPPS 60
PTARKKMLKK GTSTMDSSKK TDVEERPRTT LIICPLSVLS NWIDQLGQHI KPEVHLNFYV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAGAAAAA TTACTGCCCA GCACATTGAA AGTAGTGATT CAGATGAAAT TGAAACAATT 60
GAATTGCCAC AGAAGATAAA AGGTAGTATA TAACGGATTT GATTTGATAT TGTATCCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR030065--HLTF
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016887--F:ATPase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006301--P:postreplication repair
GO:0000209--P:protein polyubiquitination
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	38.59	2.00e-107	383.00
IUUC-Aml-001237	Ailuropoda melanoleuca	88.91	0.00e+00	1062.00
IUUC-Atr-003058	Amborella trichopoda	37.91	1.00e-106	381.00
IUUC-Apl-003679	Anas platyrhynchos	29.66	2.00e-66	247.00
IUUC-Aca-004994	Anolis carolinensis	71.28	0.00e+00	827.00
IUUC-Aly-005898	Arabidopsis lyrata	42.80	7.00e-120	424.00
IUUC-Ath-007559	Arabidopsis thaliana	42.20	2.00e-121	430.00
IUUC-Ago-007997	Ashbya gossypii	34.33	7.00e-77	282.00
IUUC-Acl-008053	Aspergillus clavatus	37.09	5.00e-80	292.00
IUUC-Afl-008514	Aspergillus flavus	30.52	2.00e-83	304.00
IUUC-Afu-008767	Aspergillus fumigatus	35.86	6.00e-86	312.00
IUUC-Ani-009435	Aspergillus nidulans	35.10	4.00e-85	309.00
IUUC-Ang-009785	Aspergillus niger	33.45	5.00e-87	316.00
IUUC-Aor-010130	Aspergillus oryzae	36.66	2.00e-85	310.00
IUUC-Ate-010582	Aspergillus terreus	34.04	6.00e-78	285.00
IUUC-Ame-011743	Astyanax mexicanus	58.84	0.00e+00	647.00
IUUC-Bgr-012147	Blumeria graminis	34.25	5.00e-85	309.00
IUUC-Bta-013391	Bos taurus	88.37	0.00e+00	1082.00
IUUC-Bci-013741	Botrytis cinerea	34.34	2.00e-86	313.00
IUUC-Bdi-014267	Brachypodium distachyon	41.39	1.00e-118	421.00
IUUC-Bol-016075	Brassica oleracea	42.78	9.00e-124	437.00
IUUC-Bra-017057	Brassica rapa	43.04	2.00e-122	433.00
IUUC-Cja-019685	Callithrix jacchus	87.00	0.00e+00	1097.00
IUUC-Cfa-020485	Canis familiaris	88.59	0.00e+00	1057.00
IUUC-Cre-022824	Chlamydomonas reinhardtii	29.58	1.00e-62	235.00
IUUC-Csa-023894	Chlorocebus sabaeus	87.48	0.00e+00	1079.00
IUUC-Cho-024891	Choloepus hoffmanni	90.74	0.00e+00	712.00
IUUC-Csv-026168	Ciona savignyi	29.58	6.00e-52	199.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	34.62	2.00e-88	321.00
IUUC-Cne-026829	Cryptococcus neoformans	37.39	2.00e-94	340.00
IUUC-Cme-027110	Cyanidioschyzon merolae	34.15	1.00e-90	328.00
IUUC-Dre-027867	Danio rerio	61.99	0.00e+00	715.00
IUUC-Dno-029517	Dasypus novemcinctus	86.84	0.00e+00	1056.00
IUUC-Dor-030590	Dipodomys ordii	85.75	2.00e-171	596.00
IUUC-Dse-031471	Dothistroma septosporum	31.14	2.00e-80	294.00
IUUC-Dme-031815	Drosophila melanogaster	30.24	4.00e-53	203.00
IUUC-Ete-032421	Echinops telfairi	71.91	0.00e+00	835.00
IUUC-Eca-034058	Equus caballus	87.62	0.00e+00	1037.00
IUUC-Eeu-034597	Erinaceus europaeus	66.13	0.00e+00	752.00
IUUC-Fca-035390	Felis catus	89.39	0.00e+00	1087.00
IUUC-Fox-037751	Fusarium oxysporum	37.86	1.00e-87	317.00
IUUC-Fso-038179	Fusarium solani	34.58	8.00e-89	322.00
IUUC-Gmo-038544	Gadus morhua	54.61	0.00e+00	659.00
IUUC-Ggr-039735	Gaeumannomyces graminis	32.39	5.00e-75	276.00
IUUC-Gga-040472	Gallus gallus	32.33	6.00e-37	149.00
IUUC-Gac-042401	Gasterosteus aculeatus	59.85	0.00e+00	686.00
IUUC-Gma-044315	Glycine max	37.73	8.00e-100	358.00
IUUC-Ggo-045628	Gorilla gorilla	88.04	0.00e+00	1075.00
IUUC-Hsa-045930	Homo sapiens	87.64	0.00e+00	1082.00
IUUC-Hvu-047747	Hordeum vulgare	37.90	2.00e-107	383.00
IUUC-Itr-048493	Ictidomys tridecemlineatus	89.26	0.00e+00	1109.00
IUUC-Kpa-049087	Komagataella pastoris	34.45	7.00e-83	302.00
IUUC-Lch-050617	Latimeria chalumnae	75.14	0.00e+00	875.00
IUUC-Lpe-051724	Leersia perrieri	43.44	2.00e-123	436.00
IUUC-Loc-052785	Lepisosteus oculatus	64.21	0.00e+00	765.00
IUUC-Lma-052956	Leptosphaeria maculans	32.12	2.00e-81	297.00
IUUC-Laf-054309	Loxodonta africana	85.23	0.00e+00	1042.00
IUUC-Mcc-055493	Macaca mulatta	87.40	0.00e+00	1077.00
IUUC-Meu-056270	Macropus eugenii	83.01	0.00e+00	869.00
IUUC-Mor-056943	Magnaporthe oryzae	37.34	5.00e-92	332.00
IUUC-Mpo-057407	Magnaporthe poae	32.72	5.00e-81	296.00
IUUC-Mtr-058172	Medicago truncatula	42.72	1.00e-116	414.00
IUUC-Mla-059170	Melampsora laricipopulina	32.81	2.00e-75	277.00
IUUC-Mga-059553	Meleagris gallopavo	29.76	1.00e-65	245.00
IUUC-Mvi-060365	Microbotryum violaceum	32.77	2.00e-82	300.00
IUUC-Mmr-061043	Microcebus murinus	87.30	0.00e+00	1038.00
IUUC-Mdo-062919	Monodelphis domestica	81.03	0.00e+00	932.00
IUUC-Mmu-064338	Mus musculus	85.05	0.00e+00	1043.00
IUUC-Mac-065666	Musa acuminata	36.04	1.00e-87	318.00
IUUC-Mpu-066781	Mustela putorius furo	88.59	0.00e+00	1056.00
IUUC-Mlu-068076	Myotis lucifugus	86.73	0.00e+00	1065.00
IUUC-Nfi-068386	Neosartorya fischeri	34.95	2.00e-82	300.00
IUUC-Ncr-068858	Neurospora crassa	36.50	2.00e-88	320.00
IUUC-Nle-069947	Nomascus leucogenys	88.12	0.00e+00	1086.00
IUUC-Opr-070388	Ochotona princeps	90.94	4.00e-148	519.00
IUUC-Ont-071782	Oreochromis niloticus	61.08	0.00e+00	672.00
IUUC-Oan-073331	Ornithorhynchus anatinus	79.33	0.00e+00	983.00
IUUC-Ocu-074705	Oryctolagus cuniculus	89.39	0.00e+00	1075.00
IUUC-Oba-075881	Oryza barthii	42.83	5.00e-121	428.00
IUUC-Obr-076344	Oryza brachyantha	42.22	2.00e-116	412.00
IUUC-Ogl-076957	Oryza glaberrima	42.83	5.00e-121	428.00
IUUC-Ogu-078648	Oryza glumaepatula	41.79	3.00e-115	409.00
IUUC-Oin-079449	Oryza indica	41.90	5.00e-116	412.00
IUUC-Olo-080721	Oryza longistaminata	42.46	1.00e-116	413.00
IUUC-Ome-081579	Oryza meridionalis	41.70	5.00e-117	415.00
IUUC-Oni-083054	Oryza nivara	41.90	5.00e-116	412.00
IUUC-Opu-083706	Oryza punctata	42.17	2.00e-117	417.00
IUUC-Oru-085259	Oryza rufipogon	41.90	7.00e-116	411.00
IUUC-Osa-085568	Oryza sativa	42.24	6.00e-103	368.00
IUUC-Ola-086830	Oryzias latipes	57.38	2.00e-178	619.00
IUUC-Olu-087669	Ostreococcus lucimarinus	28.66	1.00e-55	211.00
IUUC-Oga-088120	Otolemur garnettii	86.84	0.00e+00	1010.00
IUUC-Oar-089293	Ovis aries	87.66	0.00e+00	1085.00
IUUC-Ptr-091418	Pan troglodytes	87.48	0.00e+00	1081.00
IUUC-Pan-092579	Papio anubis	85.71	0.00e+00	647.00
IUUC-Psi-093626	Pelodiscus sinensis	72.03	0.00e+00	860.00
IUUC-Pno-094841	Phaeosphaeria nodorum	38.84	5.00e-90	325.00
IUUC-Ppa-095291	Physcomitrella patens	46.89	1.00e-143	504.00
IUUC-Pfo-096540	Poecilia formosa	58.07	0.00e+00	675.00
IUUC-Pab-098010	Pongo abelii	87.48	0.00e+00	1077.00
IUUC-Pop-099320	Populus trichocarpa	37.34	6.00e-107	382.00
IUUC-Pca-100648	Procavia capensis	78.81	0.00e+00	1018.00
IUUC-Ppe-102077	Prunus persica	43.39	7.00e-106	378.00
IUUC-Pva-102896	Pteropus vampyrus	86.63	0.00e+00	864.00
IUUC-Pgr-103445	Puccinia graminis	31.70	5.00e-74	272.00
IUUC-Ptt-103829	Puccinia triticina	31.35	6.00e-68	253.00
IUUC-Pte-104242	Pyrenophora teres	33.00	5.00e-84	306.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	32.45	2.00e-81	297.00
IUUC-Rno-106130	Rattus norvegicus	84.24	0.00e+00	1036.00
IUUC-Sce-106396	Saccharomyces cerevisiae	31.09	4.00e-71	263.00
IUUC-Sha-107221	Sarcophilus harrisii	81.37	0.00e+00	957.00
IUUC-Sja-107672	Schizosaccharomyces japonicus	31.86	2.00e-88	320.00
IUUC-Spo-108026	Schizosaccharomyces pombe	32.06	1.00e-83	305.00
IUUC-Ssl-108388	Sclerotinia sclerotiorum	35.34	5.00e-89	322.00
IUUC-Smo-109311	Selaginella moellendorffii	44.30	6.00e-133	468.00
IUUC-Sit-109770	Setaria italica	42.75	1.00e-119	424.00
IUUC-Sly-111908	Solanum lycopersicum	37.93	4.00e-108	386.00
IUUC-Stu-112600	Solanum tuberosum	38.63	3.00e-107	383.00
IUUC-Sar-113719	Sorex araneus	87.00	0.00e+00	1111.00
IUUC-Sbi-113927	Sorghum bicolor	37.36	1.00e-102	367.00
IUUC-Sre-115131	Sporisorium reilianum	30.82	5.00e-73	270.00
IUUC-Ssc-116186	Sus scrofa	88.28	0.00e+00	1099.00
IUUC-Tru-117768	Takifugu rubripes	57.12	0.00e+00	628.00
IUUC-Tsy-118957	Tarsius syrichta	84.73	0.00e+00	1019.00
IUUC-Tni-120618	Tetraodon nigroviridis	55.90	0.00e+00	663.00
IUUC-Tca-121146	Theobroma cacao	37.78	2.00e-110	394.00
IUUC-Tre-121896	Trichoderma reesei	35.81	8.00e-95	342.00
IUUC-Tvi-122597	Trichoderma virens	35.34	4.00e-92	333.00
IUUC-Tae-123773	Triticum aestivum	42.69	6.00e-110	391.00
IUUC-Tur-125999	Triticum urartu	39.23	8.00e-109	388.00
IUUC-Tme-126953	Tuber melanosporum	34.81	8.00e-91	328.00
IUUC-Tbe-127612	Tupaia belangeri	65.52	5.00e-92	332.00
IUUC-Ttr-128243	Tursiops truncatus	85.22	0.00e+00	635.00
IUUC-Uma-129441	Ustilago maydis	28.90	4.00e-74	273.00
IUUC-Vda-129933	Verticillium dahliae	36.17	2.00e-80	294.00
IUUC-Vpa-130672	Vicugna pacos	88.60	0.00e+00	1075.00
IUUC-Vvi-131204	Vitis vinifera	44.38	3.00e-128	452.00
IUUC-Xtr-132730	Xenopus tropicalis	65.06	0.00e+00	841.00
IUUC-Xma-133384	Xiphophorus maculatus	58.99	0.00e+00	683.00
IUUC-Yli-134588	Yarrowia lipolytica	32.30	2.00e-71	263.00
IUUC-Zma-134966	Zea mays	43.57	2.00e-126	446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence