iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121263

Ensembl Protein ID

EOY12990

UniProt Accession

A0A061F6J4; A0A061F6J4_THECC

Genbank Protein ID

EOY12990.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001885

Gene Name

TCM_031495

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_031495	EOY12990	EOY12990

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-15	58.9	322	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+d+   +  +v p C+H+fh++C+ +w        ++ +CP+Cr
   Q: 322  CAICLDDYvvGEVCRVFPaCKHTFHLSCIDHW------LENHRTCPVCR 364
           ********88553556668*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MVLSLLAQTL ALGSPSTIPN NATFNLDDFR TSIFVCIIGL MLFYLFYQIL DRFLNCLPNE 60
RYDRDIELQD IANHRSAANS HWSREVAVHN SLWLLETLNG FMTLLAERQG LSPEDSEKSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGACTAAC AATAGTAAAT TAACAATTAG TTATGATGGT TTATTTGATT CAAAATAAAA 60
ATATAAGAGT TTAATTTAAT AAAATAAAAT AATAAAAATT TATTTAAAAA TTTTAAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006007	Arabidopsis lyrata	42.44	1.00e-28	118.00
IUUC-Ath-006973	Arabidopsis thaliana	40.35	9.00e-25	105.00
IUUC-Bol-015825	Brassica oleracea	42.69	1.00e-25	108.00
IUUC-Bra-016968	Brassica rapa	44.44	7.00e-26	108.00
IUUC-Gma-044282	Glycine max	36.36	9.00e-21	92.00
IUUC-Mtr-057851	Medicago truncatula	37.84	4.00e-17	80.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence