iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099428

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000353

Gene Name

POPTRDRAFT_825535; POPTR_0017s11520g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s11520	POPTR_0017s11520.1	POPTR_0017s11520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-19	70.6	72	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl..af...sd.tllvsGsdDgtikvWDlr 31
           gH+++v  l  ++    + + l+sG+ Dgt+++W+l+
   Q: 72   GHNGPVLTLsdKLlgdGSaKVLASGGEDGTVRLWSLS 108
           677777776543455422578**************86 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTNIDSFLNG RDGVTALSDH NARITCMRLF PLSETSLFRS ETQRKENVLV TSSCDHSIRL 60
WWKGSCQRCF RGHNGPVLTL SDKLLGDGSA KVLASGGEDG TVRLWSLSSS GKRGQHALKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGCAG AGCCATCAAG CACAGCAACA ACAACCAGGA TTACGGATTT GAACGAGGAC 60
TCGCTGGCTC ACTGTGCCAC TTACTTGTCC CTTCAGGACC TCTCCAATTT AGCCACGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0017s11520g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003129	Amborella trichopoda	53.13	2.00e-95	342.00
IUUC-Bdi-014621	Brachypodium distachyon	51.97	3.00e-85	308.00
IUUC-Gma-043867	Glycine max	71.39	9.00e-148	516.00
IUUC-Hvu-047817	Hordeum vulgare	49.86	2.00e-87	315.00
IUUC-Lpe-051161	Leersia perrieri	53.50	8.00e-90	323.00
IUUC-Mtr-057899	Medicago truncatula	64.00	6.00e-124	436.00
IUUC-Mac-065373	Musa acuminata	60.70	2.00e-105	375.00
IUUC-Oba-075705	Oryza barthii	51.54	1.00e-88	320.00
IUUC-Obr-076913	Oryza brachyantha	51.57	3.00e-85	308.00
IUUC-Ogl-077871	Oryza glaberrima	51.82	5.00e-89	320.00
IUUC-Ogu-078128	Oryza glumaepatula	51.82	6.00e-89	320.00
IUUC-Oin-079947	Oryza indica	51.82	5.00e-89	321.00
IUUC-Olo-080246	Oryza longistaminata	50.14	9.00e-84	303.00
IUUC-Ome-081308	Oryza meridionalis	51.67	2.00e-89	322.00
IUUC-Oni-082542	Oryza nivara	51.82	5.00e-89	320.00
IUUC-Opu-083600	Oryza punctata	52.66	1.00e-87	316.00
IUUC-Oru-084880	Oryza rufipogon	51.54	8.00e-89	320.00
IUUC-Osa-085335	Oryza sativa	51.82	3.00e-89	321.00
IUUC-Ppa-095334	Physcomitrella patens	48.31	1.00e-74	273.00
IUUC-Ppe-101795	Prunus persica	75.30	3.00e-109	388.00
IUUC-Smo-108689	Selaginella moellendorffii	43.01	2.00e-58	219.00
IUUC-Sit-110574	Setaria italica	51.56	6.00e-85	307.00
IUUC-Sly-111776	Solanum lycopersicum	57.49	4.00e-113	400.00
IUUC-Stu-112081	Solanum tuberosum	59.23	1.00e-93	335.00
IUUC-Sbi-114123	Sorghum bicolor	49.57	4.00e-82	298.00
IUUC-Tca-120973	Theobroma cacao	74.25	2.00e-155	541.00
IUUC-Tae-124174	Triticum aestivum	50.56	5.00e-86	310.00
IUUC-Vvi-131356	Vitis vinifera	77.93	3.00e-165	574.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence