iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-101697

Ensembl Protein ID

EMJ14851

UniProt Accession

M5WNL9; M5WNL9_PRUPE

Genbank Protein ID

EMJ14851.1

Protein Name

Katanin p80 WD40 repeat-containing subunit B1 homolog

Genbank Nucleotide ID

KB639078

Gene Name

PRUPE_ppa001393mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa001393mg	EMJ14851	EMJ14851

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-33	112.6	140	178
UBD/Beta-Prp	9.80e-60	202.7	72	248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +++ ++f +d + +vsG+ D+++kvWDl+ g+ll+
   Q: 140  GHTQGISTIKFtPDgRWVVSGGFDNVVKVWDLTAGKLLH 178
           8***********99999******************9986 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle 124
           l+++g  +g +k+wd+++ k++r+lsgh +  tav+f+p g+++++gs+D ++k+wd+++  c+ht+kgh++ + +++f p+g ++vsG+ d++++vwdl 
   Q: 72   LVLAGASSGVTKIWDLEETKMVRTLSGHRSSCTAVEFHPFGEFFASGSTDTNLKIWDIRKKGCIHTYKGHTQGISTIKFTPDGRWVVSGGFDNVVKVWDLT 172
           6788999********************************************************************************************** PP
   S: 125  tgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
            g+ l+  ++ h+g ++++ +hp ++ll++Gs+Drtv++Wdl+t +l+   +      v+ ++f+++g+ l sg +d+
   Q: 173  AGKLLH-DFKFHEGHIRSIGFHPLEFLLATGSADRTVKFWDLETFELIGSTRP-EPTGVRTIAFHPDGRTLFSGLDDS 248
           ******.9999****************************************98.9*****************997764 PP

Organism

Prunus persica

Functional Description
(View)

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.

Protein Sequence
(Fasta)

MAKRAYKLQE FVAHSDNINC LNIGKKACRL FVTGGDDHIV NLWTIGKPTS LMSLASHTSP 60
VESVAFNSAE VLVLAGASSG VTKIWDLEET KMVRTLSGHR SSCTAVEFHP FGEFFASGST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTAAGC GCGCATATAA GCTGCGTATC CTTTTCTAAA TGTTTGATTT TCTTGAGATG 60
CTTAGCTGGA ATTGAACTCT GTTTTTTACA ATCTTGATCT AATTATAATG TGGTATCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

KEGG

pper:PRUPE_ppa001393mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005897	Arabidopsis lyrata	58.69	8.00e-175	607.00
IUUC-Ath-006624	Arabidopsis thaliana	63.06	0.00e+00	634.00
IUUC-Bol-015355	Brassica oleracea	60.15	5.00e-180	624.00
IUUC-Bra-017265	Brassica rapa	60.04	3.00e-180	625.00
IUUC-Gma-043323	Glycine max	63.52	0.00e+00	1022.00
IUUC-Hvu-047729	Hordeum vulgare	47.62	9.00e-148	516.00
IUUC-Mtr-057706	Medicago truncatula	65.42	0.00e+00	749.00
IUUC-Pop-100006	Populus trichocarpa	62.31	0.00e+00	802.00
IUUC-Smo-109379	Selaginella moellendorffii	64.15	2.00e-132	466.00
IUUC-Sly-111901	Solanum lycopersicum	61.09	0.00e+00	676.00
IUUC-Tca-121590	Theobroma cacao	69.06	0.00e+00	828.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence