iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006034

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-specific protease 15

Genbank Nucleotide ID

GL348713

Gene Name

UBP15; ARALYDRAFT_889106

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_101900.1	scaffold_101900.1	scaffold_101900.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.20e-78	263.6	443	747

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDa 92
           Gl N gN+CY N+vLQ+L+ +++l  +ll+ +++++++     +++ +l+++l++ +  l  ++ +  s +++l+++++++ ++   +q+Da
   Q: 443  GLVNCGNSCYANAVLQSLTCTKPLVAYLLRrSHSRSCS-----GKDWCLMCELEQHVMML-RESGGPLSASRILSHMRSINCQIGDGSQEDA 528
           9*****************************44455554.....6678**********766.9999*************************** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkk 184
           +Efl+ l+ ++++ +                ++l  e + ++  ++++l++++F+g+l+s++kcl+cd++s+r+e+ +dl+l++ g  e   
   Q: 529  HEFLRLLVASMQSIC---------------LERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVE--- 602
           ***************...............22344556788999******************************************996... PP
   S: 185  eslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekk 276
            slqd+L +ft++e l+gen+y c++c ++++a+k+l++++ P++L++ LkRf    ++++  kink+++fp++Ld+ pf+t++  ++  + 
   Q: 603  -SLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRF----QEGRYGKINKCISFPEMLDMIPFMTRTG-DV--PP 686
           .8***************************************************....458889********************44.44..9* PP
   S: 277  kYeLiavvvHsGsls...sGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
            Y L+av+vH  +l+   sGHY++yvk+ +g+W+++dDs+++ v++++v +   + aY+lfY+r
   Q: 687  LYMLYAVIVHLDTLNasfSGHYISYVKDLRGNWYRIDDSEIHRVPMTQVMS---EGAYMLFYMR 747
           **********997664458********************************...********98 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MLEPRGADIP ILFLVLVVLP VVAYILLGKW SDISEKRGRA NLLAQMAAEE ALRAETLVNA 60
NRGVRFESVA TENRAQRTKT KNVSAASAAV RAEFDAGVSE NVAEQRSDSV TATCGVPVVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATGCGT GTCTGGGGAC ATGCTCGAAC CAAGGGGAGC GGACATACCA ATATTGTTCC 60
TGGTTTTGGT TGTACTTCCT GTGGTAGCTT ACATATTATT AGGAAAATGG AGTGACATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_889106

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000426	Aegilops tauschii	47.55	1.00e-157	549.00
IUUC-Atr-003062	Amborella trichopoda	55.62	5.00e-150	524.00
IUUC-Ath-007599	Arabidopsis thaliana	92.51	0.00e+00	1654.00
IUUC-Bdi-014717	Brachypodium distachyon	42.61	0.00e+00	636.00
IUUC-Bol-015616	Brassica oleracea	82.06	0.00e+00	1462.00
IUUC-Bra-017955	Brassica rapa	82.51	0.00e+00	1486.00
IUUC-Gma-043399	Glycine max	62.28	0.00e+00	676.00
IUUC-Lpe-051615	Leersia perrieri	55.83	8.00e-153	533.00
IUUC-Mtr-058164	Medicago truncatula	50.06	0.00e+00	761.00
IUUC-Mac-065271	Musa acuminata	64.86	3.00e-167	581.00
IUUC-Opr-071170	Ochotona princeps	41.36	4.00e-59	223.00
IUUC-Oba-075960	Oryza barthii	51.75	9.00e-156	543.00
IUUC-Obr-076330	Oryza brachyantha	53.57	2.00e-160	559.00
IUUC-Ogl-077370	Oryza glaberrima	54.99	1.00e-160	559.00
IUUC-Ogu-078615	Oryza glumaepatula	51.75	8.00e-156	543.00
IUUC-Oin-079409	Oryza indica	52.13	2.00e-161	561.00
IUUC-Olo-080550	Oryza longistaminata	60.87	1.00e-155	543.00
IUUC-Ome-081508	Oryza meridionalis	49.33	6.00e-156	544.00
IUUC-Oni-082740	Oryza nivara	51.75	8.00e-156	543.00
IUUC-Opu-083669	Oryza punctata	66.67	1.00e-137	483.00
IUUC-Oru-084502	Oryza rufipogon	51.75	8.00e-156	543.00
IUUC-Osa-085475	Oryza sativa	54.99	1.00e-160	559.00
IUUC-Olu-087767	Ostreococcus lucimarinus	38.34	1.00e-59	222.00
IUUC-Pop-099882	Populus trichocarpa	52.46	0.00e+00	816.00
IUUC-Ppe-101942	Prunus persica	51.76	0.00e+00	795.00
IUUC-Sit-109825	Setaria italica	57.42	3.00e-162	565.00
IUUC-Sly-111027	Solanum lycopersicum	60.96	0.00e+00	677.00
IUUC-Sbi-114225	Sorghum bicolor	58.50	4.00e-164	571.00
IUUC-Tca-121618	Theobroma cacao	50.74	0.00e+00	850.00
IUUC-Tae-123144	Triticum aestivum	71.08	2.00e-146	511.00
IUUC-Tur-126234	Triticum urartu	46.72	4.00e-157	548.00
IUUC-Vvi-131600	Vitis vinifera	51.61	0.00e+00	808.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence