iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_125000003	fgenesh1_pg.C_scaffold_125000003	fgenesh1_pg.C_scaffold_125000003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	7.50e-23	80.9	77	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglkdgstihll 70
           vtvk +  + +t++v++++tV+ LK+ki+  +++p  +++L+y+G++L +d + L++yg+ + s i++ 
   Q: 77   VTVKFPS-KQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSGIELaDDYRNLNEYGISEFSEIVVF 144
           5555555.399*************************************9999********998888875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEISEQESVL EVKKRLGQFL QIPASSLTLF VSCWELIDGL DIEDYPIISH GTRIDLTVTP 60
LFTAPSFINP AIRKIHVTVK FPSKQFTVEV DRTETVSSLK DKIHIVENTP IKRMQLYYSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAATCA GCGAACAAGA ATCTGTGTTG GAGGTCAAGA AACGTTTAGG ACAGTTTCTT 60
CAGATCCCAG CATCTTCTTT AACTCTCTTT GTCTCTTGTT GGGAACTCAT CGACGGTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

aly:ARALYDRAFT_359335

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007487	Arabidopsis thaliana	96.69	7.00e-139	485.00
IUUC-Bol-016422	Brassica oleracea	89.67	8.00e-131	458.00
IUUC-Bra-017026	Brassica rapa	89.67	1.00e-130	457.00
IUUC-Gma-042810	Glycine max	57.02	2.00e-77	280.00
IUUC-Mtr-058444	Medicago truncatula	55.37	7.00e-79	286.00
IUUC-Pop-098832	Populus trichocarpa	58.08	2.00e-67	247.00
IUUC-Ppe-101165	Prunus persica	56.20	7.00e-74	269.00
IUUC-Sly-111500	Solanum lycopersicum	51.44	4.00e-72	263.00
IUUC-Tca-121342	Theobroma cacao	60.74	3.00e-85	307.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence