iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110871

Ensembl Protein ID

Solyc10g049740.1.1

UniProt Accession

K4D0D1; K4D0D1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g049740.1	Solyc10g049740.1.1	Solyc10g049740.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.70e-06	27.3	636	675

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C +C+++ +d p+v++C Hvf+++Cl  +    + s ++ +CP C
   Q: 636  CGLCHDPVED-PVVTSCTHVFCKSCLIDF----SASVGQVSCPSC 675
           9*********.999***********9666....789********* PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MKLRSRPSSS PAEGKQSRQY QDSSDEDDLL SIPSDSEYNV ISDEDVADEV VNLTEEVVCF 60
NRTKRNGGKK WIETKEDQGE EEEHVDLVLN EVGGGGEVDA GYLQLIGRIE DRKKIREKNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTCC GTTCTCGTCC TTCTTCCTCT CCCGCCGAAG GTTTCATCGG AAAATCCTTC 60
CTTTTATGGT TTCTGCTTCT CTATACATAT GCGATCATAC TTTTTTTTTT TCTTTTCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00487--DEXDc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000449	Aegilops tauschii	57.98	0.00e+00	728.00
IUUC-Atr-002602	Amborella trichopoda	58.06	0.00e+00	764.00
IUUC-Aly-005572	Arabidopsis lyrata	64.63	0.00e+00	893.00
IUUC-Ath-007571	Arabidopsis thaliana	65.65	0.00e+00	907.00
IUUC-Bdi-015009	Brachypodium distachyon	56.81	0.00e+00	741.00
IUUC-Bra-017729	Brassica rapa	56.92	0.00e+00	782.00
IUUC-Gma-042935	Glycine max	66.91	0.00e+00	937.00
IUUC-Lpe-050970	Leersia perrieri	52.46	0.00e+00	676.00
IUUC-Mtr-058123	Medicago truncatula	66.62	0.00e+00	895.00
IUUC-Obr-076549	Oryza brachyantha	56.98	0.00e+00	689.00
IUUC-Ogl-077889	Oryza glaberrima	60.00	0.00e+00	686.00
IUUC-Ogu-078593	Oryza glumaepatula	56.16	1.00e-173	602.00
IUUC-Oin-080110	Oryza indica	49.93	9.00e-172	596.00
IUUC-Olo-080282	Oryza longistaminata	52.02	5.00e-174	603.00
IUUC-Ome-081180	Oryza meridionalis	52.48	0.00e+00	690.00
IUUC-Oni-082941	Oryza nivara	56.16	1.00e-173	602.00
IUUC-Opu-083720	Oryza punctata	52.24	0.00e+00	659.00
IUUC-Oru-085272	Oryza rufipogon	54.83	0.00e+00	700.00
IUUC-Osa-085537	Oryza sativa	59.43	0.00e+00	671.00
IUUC-Pop-099503	Populus trichocarpa	65.94	0.00e+00	919.00
IUUC-Ppe-102071	Prunus persica	67.14	0.00e+00	957.00
IUUC-Sit-110565	Setaria italica	59.93	0.00e+00	637.00
IUUC-Stu-112856	Solanum tuberosum	91.13	0.00e+00	1398.00
IUUC-Sbi-114800	Sorghum bicolor	54.74	0.00e+00	758.00
IUUC-Tca-121230	Theobroma cacao	67.91	0.00e+00	944.00
IUUC-Tae-125864	Triticum aestivum	55.98	0.00e+00	747.00
IUUC-Tur-126489	Triticum urartu	53.40	6.00e-166	577.00
IUUC-Vvi-131253	Vitis vinifera	69.60	0.00e+00	956.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence