iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098811

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTR_0001s24180g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s24180	POPTR_0001s24180.1	POPTR_0001s24180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.10e-06	27.8	32	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f++g  ++ lp C Hvfh+ C+  w       + + +CPlCr
   Q: 32   CAVCLGEFQEGewLKHLPnCCHVFHTACIDTW------FQSHTNCPLCR 74
           ********88777444667*************......999999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

CHGLEPSMTR ALPIAQFEKK NKEESSPSNN ECAVCLGEFQ EGEWLKHLPN CCHVFHTACI 60
DTWFQSHTNC PLCRSHVFNL NIPTREELSQ EREANYLVLR SQILQNLALG P 111

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Nucleotide Sequence
(Fasta)

TGTCATGGAC TCGAGCCCTC CATGACGCGC GCTCTCCCCA TCGCTCAGTT TGAGAAGAAG 60
AATAAAGAAG AATCAAGTCC AAGCAATAAT GAATGTGCAG TATGCTTGGG TGAATTTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s24180g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043983	Glycine max	61.33	2.00e-24	104.00
IUUC-Mtr-058212	Medicago truncatula	60.47	2.00e-27	115.00
IUUC-Ppe-101262	Prunus persica	61.04	7.00e-25	105.00
IUUC-Sly-111098	Solanum lycopersicum	53.04	1.00e-28	119.00
IUUC-Stu-112473	Solanum tuberosum	51.69	3.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence