iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017338

Ensembl Protein ID

Bra008475.1-P

UniProt Accession

M4CW78; M4CW78_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra008475	Bra008475.1	Bra008475.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-09	37.7	351	392

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++  +++++ lpC Hvfh dC+ kw       + +++CPlC+
   Q: 351  CCICLARYgdDEEVRELPCLHVFHVDCVDKW------LKINATCPLCK 392
           ********98666******************......**********7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDVSSIGRNT SQTDQDPLLM EEHHHNHEHI VDITGNDYDS SSSRSSLDEL TPHHQLQERA 60
SSSNATQLPP PPSQQRADGG RTSSTSTSRR SPLNSGLWIS VELVVTVAQI VAAIVVMVLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGTTT CTTCCATTGG TCGAAATACA TCCCAAACTG ATCAAGATCC TTTGTTGATG 60
GAGGAACACC ACCATAACCA CGAGCACATC GTTGACATCA CTGGCAACGA CTACGACTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006190	Arabidopsis lyrata	78.41	1.00e-148	518.00
IUUC-Ath-007004	Arabidopsis thaliana	78.83	9.00e-146	509.00
IUUC-Bol-016575	Brassica oleracea	94.72	3.00e-159	553.00
IUUC-Gma-043870	Glycine max	58.03	4.00e-128	451.00
IUUC-Ppe-101804	Prunus persica	70.38	9.00e-131	459.00
IUUC-Tca-121516	Theobroma cacao	60.14	9.00e-135	473.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence