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Tag Content
iUUCD ID IUUC-Lch-050420
Ensembl Protein ID ENSLACP00000012645.2
UniProt Accession H3ASM4; H3ASM4_LATCH
Genbank Protein ID ENSLACP00000012645
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01077449
Gene Name RFWD2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000011141.2 ENSLACT00000012739.2 ENSLACP00000012645.2
ENSLACG00000011141.2 ENSLACT00000012740.1 ENSLACP00000012646.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.60e-24 85.2 441 470
E3 activity/RING/RING 2.20e-06 28.3 105 143
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWD 29
           +++++c+++     +ll+s+ + gt+ +WD
   Q: 441  NSKISCISWssYHkNLLASSDYEGTVILWD 470
           689******9622599************** PP
   

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++++  + + CgH f+ +C+ +          + rCP C+
   Q: 105  CPICFEMIEE-AYMTKCGHSFCSKCIRQS------LEDSNRCPKCN 143
           ********99.888***********9555......899999****6 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MSASRQQQQC PGQGSSGTAV PAAAPSSSSG AGRPGTSAGQ AAVTAAAAAS GSGVGLARVG 60
AGRAGSSSSS SSSSSQSGSR KRPLLTPLCN GLLNSYEDKS NDFVCPICFE MIEEAYMTKC 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050420|E3,WD_repeat;E3,RING|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGCGATTGCG TCACGCAAGC GAGCATTTTG GTACATGCGG ACAATAGTAA GTGTGGTACG 60
CGATGACGTT TTACGTGCGC GAGGGGCTGG TCGCTGTGGA GACGCCGCGG CCCGTTCGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050420|E3,WD_repeat;E3,RING|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00400--WD40
SMART

SM00184--RING
SM00320--WD40
Gene Ontology

GO:0008270--F:zinc ion binding
KEGG lcm:102363850
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000885 Aegilops tauschii 39.84 7.00e-127 447.00
IUUC-Aml-001265 Ailuropoda melanoleuca 92.31 0.00e+00 1164.00
IUUC-Atr-002460 Amborella trichopoda 39.85 7.00e-129 454.00
IUUC-Apl-003796 Anas platyrhynchos 90.99 0.00e+00 1078.00
IUUC-Aca-005078 Anolis carolinensis 92.47 0.00e+00 1157.00
IUUC-Aly-006014 Arabidopsis lyrata 39.63 7.00e-132 464.00
IUUC-Ath-007636 Arabidopsis thaliana 39.69 9.00e-132 464.00
IUUC-Ame-011176 Astyanax mexicanus 78.02 1.00e-72 267.00
IUUC-Bta-012595 Bos taurus 92.20 0.00e+00 1167.00
IUUC-Bdi-014152 Brachypodium distachyon 39.94 2.00e-129 456.00
IUUC-Bol-016380 Brassica oleracea 39.67 3.00e-133 468.00
IUUC-Bra-017690 Brassica rapa 39.00 9.00e-128 450.00
IUUC-Cja-018926 Callithrix jacchus 92.04 0.00e+00 1164.00
IUUC-Cfa-021088 Canis familiaris 92.04 0.00e+00 1165.00
IUUC-Cpo-022442 Cavia porcellus 91.06 0.00e+00 1127.00
IUUC-Cre-022579 Chlamydomonas reinhardtii 33.45 2.00e-33 135.00
IUUC-Csa-024119 Chlorocebus sabaeus 91.88 0.00e+00 1164.00
IUUC-Cho-024883 Choloepus hoffmanni 64.26 9.00e-102 364.00
IUUC-Cin-025375 Ciona intestinalis 55.59 0.00e+00 684.00
IUUC-Cme-027350 Cyanidioschyzon merolae 41.35 2.00e-81 297.00
IUUC-Dre-028453 Danio rerio 89.28 0.00e+00 1104.00
IUUC-Dno-029887 Dasypus novemcinctus 92.04 0.00e+00 1165.00
IUUC-Dor-031110 Dipodomys ordii 85.74 0.00e+00 836.00
IUUC-Ete-033016 Echinops telfairi 78.79 0.00e+00 964.00
IUUC-Eca-034403 Equus caballus 91.44 0.00e+00 1075.00
IUUC-Eeu-034690 Erinaceus europaeus 75.91 0.00e+00 890.00
IUUC-Fca-036475 Felis catus 91.31 0.00e+00 1081.00
IUUC-Fal-037189 Ficedula albicollis 92.04 0.00e+00 1118.00
IUUC-Gmo-039245 Gadus morhua 86.71 0.00e+00 1066.00
IUUC-Gga-040806 Gallus gallus 92.19 0.00e+00 1168.00
IUUC-Gac-042177 Gasterosteus aculeatus 87.80 0.00e+00 1102.00
IUUC-Gma-044187 Glycine max 40.21 1.00e-125 443.00
IUUC-Ggo-044430 Gorilla gorilla 89.77 0.00e+00 854.00
IUUC-Hsa-045853 Homo sapiens 92.20 0.00e+00 1165.00
IUUC-Hvu-047750 Hordeum vulgare 36.53 4.00e-98 353.00
IUUC-Itr-048238 Ictidomys tridecemlineatus 97.08 3.00e-140 490.00
IUUC-Lpe-051219 Leersia perrieri 38.54 3.00e-124 439.00
IUUC-Loc-052728 Lepisosteus oculatus 92.88 0.00e+00 1124.00
IUUC-Laf-053775 Loxodonta africana 91.83 0.00e+00 1160.00
IUUC-Meu-056595 Macropus eugenii 73.13 7.00e-168 584.00
IUUC-Mtr-058555 Medicago truncatula 40.90 2.00e-134 473.00
IUUC-Mga-059646 Meleagris gallopavo 90.85 0.00e+00 1078.00
IUUC-Mmr-060990 Microcebus murinus 92.31 0.00e+00 1164.00
IUUC-Mdo-062287 Monodelphis domestica 92.20 0.00e+00 1172.00
IUUC-Mmu-064097 Mus musculus 92.52 0.00e+00 1170.00
IUUC-Mac-065240 Musa acuminata 40.21 7.00e-132 464.00
IUUC-Mpu-066612 Mustela putorius furo 91.19 0.00e+00 1083.00
IUUC-Mlu-067967 Myotis lucifugus 89.57 0.00e+00 1083.00
IUUC-Nle-069543 Nomascus leucogenys 92.20 0.00e+00 1169.00
IUUC-Opr-070366 Ochotona princeps 77.19 0.00e+00 656.00
IUUC-Ont-071522 Oreochromis niloticus 88.52 0.00e+00 1102.00
IUUC-Oan-073409 Ornithorhynchus anatinus 91.34 0.00e+00 1081.00
IUUC-Ocu-073756 Oryctolagus cuniculus 91.78 0.00e+00 1130.00
IUUC-Oba-075149 Oryza barthii 39.84 6.00e-127 449.00
IUUC-Obr-076563 Oryza brachyantha 39.20 4.00e-127 448.00
IUUC-Ogl-077701 Oryza glaberrima 39.88 8.00e-128 450.00
IUUC-Ogu-078383 Oryza glumaepatula 39.88 8.00e-128 450.00
IUUC-Oin-079965 Oryza indica 36.68 4.00e-114 405.00
IUUC-Olo-080639 Oryza longistaminata 39.21 9.00e-126 444.00
IUUC-Ome-081821 Oryza meridionalis 39.55 1.00e-116 414.00
IUUC-Oni-082622 Oryza nivara 39.88 8.00e-128 450.00
IUUC-Opu-083295 Oryza punctata 39.63 9.00e-128 450.00
IUUC-Oru-084661 Oryza rufipogon 39.88 8.00e-128 450.00
IUUC-Osa-085766 Oryza sativa 39.88 8.00e-128 450.00
IUUC-Ola-086727 Oryzias latipes 85.32 0.00e+00 1114.00
IUUC-Olu-087702 Ostreococcus lucimarinus 43.63 2.00e-70 259.00
IUUC-Oga-088215 Otolemur garnettii 90.11 0.00e+00 1139.00
IUUC-Oar-089880 Ovis aries 91.97 0.00e+00 1134.00
IUUC-Ptr-090597 Pan troglodytes 92.20 0.00e+00 1165.00
IUUC-Pan-091987 Papio anubis 92.36 0.00e+00 1170.00
IUUC-Psi-094033 Pelodiscus sinensis 92.75 0.00e+00 1110.00
IUUC-Pma-094587 Petromyzon marinus 70.59 0.00e+00 821.00
IUUC-Ppa-095475 Physcomitrella patens 39.33 4.00e-133 468.00
IUUC-Pfo-097388 Poecilia formosa 87.20 0.00e+00 1084.00
IUUC-Pab-098029 Pongo abelii 92.20 0.00e+00 1165.00
IUUC-Pop-099319 Populus trichocarpa 39.25 1.00e-133 470.00
IUUC-Pca-100846 Procavia capensis 84.53 0.00e+00 1063.00
IUUC-Ppe-101250 Prunus persica 38.00 2.00e-121 429.00
IUUC-Pva-102407 Pteropus vampyrus 92.04 0.00e+00 1156.00
IUUC-Rno-105312 Rattus norvegicus 92.20 0.00e+00 1166.00
IUUC-Sha-106514 Sarcophilus harrisii 95.97 0.00e+00 753.00
IUUC-Smo-109418 Selaginella moellendorffii 40.77 5.00e-131 461.00
IUUC-Sit-110248 Setaria italica 39.38 2.00e-128 453.00
IUUC-Sly-110964 Solanum lycopersicum 40.83 4.00e-130 458.00
IUUC-Stu-112882 Solanum tuberosum 41.14 5.00e-131 461.00
IUUC-Sar-113230 Sorex araneus 67.45 0.00e+00 749.00
IUUC-Sbi-113962 Sorghum bicolor 37.69 2.00e-124 439.00
IUUC-Ssc-115987 Sus scrofa 87.27 2.00e-156 544.00
IUUC-Tgu-116471 Taeniopygia guttata 91.99 0.00e+00 1161.00
IUUC-Tru-118231 Takifugu rubripes 86.00 0.00e+00 1072.00
IUUC-Tsy-119415 Tarsius syrichta 91.36 0.00e+00 1089.00
IUUC-Tni-120893 Tetraodon nigroviridis 87.82 0.00e+00 1065.00
IUUC-Tca-121703 Theobroma cacao 41.55 9.00e-131 460.00
IUUC-Tae-125440 Triticum aestivum 40.93 2.00e-134 472.00
IUUC-Tur-126557 Triticum urartu 40.25 6.00e-129 454.00
IUUC-Tbe-127253 Tupaia belangeri 67.15 0.00e+00 794.00
IUUC-Ttr-129100 Tursiops truncatus 90.20 0.00e+00 1060.00
IUUC-Vpa-130613 Vicugna pacos 85.38 0.00e+00 1014.00
IUUC-Vvi-131386 Vitis vinifera 38.35 2.00e-123 436.00
IUUC-Xtr-132033 Xenopus tropicalis 91.35 0.00e+00 1189.00
IUUC-Xma-133421 Xiphophorus maculatus 87.04 0.00e+00 1081.00
Created Date 25-Jun-2017

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