iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100000

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_832057; POPTR_0006s23420g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s23420	POPTR_0006s23420.1	POPTR_0006s23420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.70e-06	27.1	227	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e +   +     lpC+H fh  Cl+ w         + +CP+Cr
   Q: 227  CAICKENLvvnD-KMQELPCKHRFHPPCLKPW------LDEHNSCPICR 268
           ******998843.3677***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGSNEQLLKK ELEELQKQLG KKQKFEDALS SLKSLLRLHY PSASPSLRKT FYSVVCRVAT 60
VLKTRYIAPG FWLAGLGLFQ EALLLTSDST EKEHLKNCIA QAKEHLDQIE NPPDVSQNSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATGGCTTG TCATCCAATC CAGATCTGGT TGCCTTTCGT CCTGGACAAG AAAAATGAAA 60
TGAAATAAAA CGACGACATT AATAAACACA GAACAATTTC AGAAATTAGG GAATTGTAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0009788--P:negative regulation of abscisic acid-activated signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0009737--P:response to abscisic acid

KEGG

pop:POPTR_0006s23420g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000652	Aegilops tauschii	58.30	2.00e-76	279.00
IUUC-Atr-002467	Amborella trichopoda	72.65	7.00e-41	158.00
IUUC-Aly-005810	Arabidopsis lyrata	67.25	7.00e-95	339.00
IUUC-Ath-007091	Arabidopsis thaliana	66.55	2.00e-94	338.00
IUUC-Bdi-014952	Brachypodium distachyon	57.43	3.00e-86	311.00
IUUC-Bol-016249	Brassica oleracea	65.49	1.00e-96	345.00
IUUC-Bra-017222	Brassica rapa	63.99	2.00e-87	315.00
IUUC-Gma-043044	Glycine max	71.38	1.00e-103	369.00
IUUC-Hvu-047837	Hordeum vulgare	59.20	2.00e-56	211.00
IUUC-Lpe-051691	Leersia perrieri	53.87	7.00e-86	309.00
IUUC-Mtr-057776	Medicago truncatula	67.93	2.00e-103	368.00
IUUC-Mac-064671	Musa acuminata	58.01	3.00e-98	350.00
IUUC-Oba-075555	Oryza barthii	53.80	5.00e-84	303.00
IUUC-Obr-076610	Oryza brachyantha	53.82	1.00e-87	315.00
IUUC-Ogl-077481	Oryza glaberrima	53.80	5.00e-84	303.00
IUUC-Ogu-078564	Oryza glumaepatula	53.80	3.00e-83	301.00
IUUC-Oin-079836	Oryza indica	54.11	5.00e-84	303.00
IUUC-Olo-080714	Oryza longistaminata	57.14	4.00e-78	283.00
IUUC-Ome-081489	Oryza meridionalis	53.87	2.00e-84	305.00
IUUC-Oni-082870	Oryza nivara	54.11	5.00e-84	303.00
IUUC-Opu-083573	Oryza punctata	52.63	4.00e-85	307.00
IUUC-Oru-084631	Oryza rufipogon	54.11	5.00e-84	303.00
IUUC-Osa-086256	Oryza sativa	53.75	4.00e-84	304.00
IUUC-Ppa-095370	Physcomitrella patens	42.53	2.00e-61	229.00
IUUC-Ppe-101308	Prunus persica	65.27	5.00e-104	370.00
IUUC-Smo-109096	Selaginella moellendorffii	44.22	7.00e-57	213.00
IUUC-Sit-109993	Setaria italica	56.44	8.00e-88	316.00
IUUC-Sly-111289	Solanum lycopersicum	65.50	8.00e-105	372.00
IUUC-Stu-112307	Solanum tuberosum	64.14	3.00e-92	330.00
IUUC-Sbi-114382	Sorghum bicolor	54.38	2.00e-90	325.00
IUUC-Tca-121281	Theobroma cacao	72.92	1.00e-110	392.00
IUUC-Tae-124788	Triticum aestivum	57.33	2.00e-84	305.00
IUUC-Tur-126002	Triticum urartu	51.74	1.00e-52	199.00
IUUC-Vvi-131628	Vitis vinifera	66.10	9.00e-94	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence