iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002977

Ensembl Protein ID

ERN01296

UniProt Accession

W1P163; W1P163_AMBTC

Genbank Protein ID

ERN01296.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI394767

Gene Name

AMTR_s00002p00252820

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00002p00252820	ERN01296	ERN01296

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-28	97.7	616	645
UBD/Beta-Prp	2.00e-48	165.6	568	741

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDl 30
           H+  +t+++f s+++l+++s D t++vWD+
   Q: 616  HSLLITDVRFsSTNRLATSSFDRTVRVWDV 645
           77789*****766****************8 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk.llrtltgghtdsvysl 186
           + ++ + +++v++++fsp+g+ l+s++h + + +w+++t +  +  l++h+ +++ v++++ +n l+++s Drtvr+Wd+ + +  lrt+tg h  sv sl
   Q: 568  IASIPASTSKVVCCHFSPDGKLLASAGHEKKAVLWNTDTFKPKS-SLEEHSLLITDVRFSS-TNRLATSSFDRTVRVWDVDNPSySLRTFTG-HIASVMSL 665
           44444556666666666666666666666666666666666666.6666666666666666.556666666666666666444324666666.66666666 PP
   S: 187  sfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           +f++n    + s++ dg +++w++ +g c r+++g    v+++rf p+  rl+ ++++++++i d++s+ + ++lq+h 
   Q: 666  DFHPNNeDLICSCDGDGEIRYWSITKGICTRQFKGG---VSQMRFQPHVGRLLAAAAENVVSILDVESQVCCHSLQGHS 741
           666666233346666666666666666666666653...4555566666666666666666666666666666666664 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSQPNWEADK MLDVYIYDYL VKKNLQASAK AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNND KHHSSDASTT YSEAQISRGR EQQPQLQQPQ QVQMQQLQML QRQVQQQQRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGC CCAACTGGGA GGCTGATAAA ATGTATATCT CTTTCTCTAG TCTTGGTGCT 60
TGTAAACTCC CTGTGTCCCT CTCCTGTTTA TGCTTTCTCT CTCTACGCAG ATTGAATGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

KEGG

atr:18429378

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	53.11	0.00e+00	727.00
IUUC-Bdi-015034	Brachypodium distachyon	53.79	0.00e+00	763.00
IUUC-Gma-043858	Glycine max	62.69	0.00e+00	732.00
IUUC-Tae-125267	Triticum aestivum	53.68	0.00e+00	752.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence