iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002671

Ensembl Protein ID

ERN13346

UniProt Accession

W1PZ75; W1PZ75_AMBTC

Genbank Protein ID

ERN13346.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI392588

Gene Name

AMTR_s00041p00118190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00041p00118190	ERN13346	ERN13346

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-23	82.5	262	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++ f CpI+ ++M dPv ++sG+t++rs+Iekw+a+ +k cPvt++p+   +l Pn+tlr+ i++w ++n
   Q: 262  LQPFYCPITQDVMVDPVEISSGQTFERSAIEKWFATENKICPVTKTPV-TGELRPNITLRKSIEEWKDRN 330
           5679********************************************.678**************9988 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSGNAILEAS LVPASEALSK VVDEIVGTLR SANDVVIEQK SFSELSSYLE KVVPVLKELM 60
HKNLSQSESV SNAIEILCRE VKIANHLISE CSKRNRFYLL INCKKIVKQI QDTTREIGRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGGGA ATGCAATTTT AGAAGCATCT CTTGTTCCTG CATCCGAGGC CCTGTCTAAG 60
GTAGTAGATG AGATAGTAGG GACATTGCGA AGTGCCAATG ATGTGGTCAT AGAGCAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18441587

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042960	Glycine max	51.69	0.00e+00	929.00
IUUC-Mtr-058231	Medicago truncatula	50.70	0.00e+00	920.00
IUUC-Mac-064496	Musa acuminata	49.90	0.00e+00	815.00
IUUC-Ppa-095511	Physcomitrella patens	41.47	0.00e+00	742.00
IUUC-Pop-099169	Populus trichocarpa	53.84	0.00e+00	949.00
IUUC-Ppe-101683	Prunus persica	54.31	0.00e+00	970.00
IUUC-Smo-109439	Selaginella moellendorffii	41.95	0.00e+00	703.00
IUUC-Sly-111419	Solanum lycopersicum	50.96	0.00e+00	913.00
IUUC-Stu-112717	Solanum tuberosum	52.54	0.00e+00	975.00
IUUC-Tca-121719	Theobroma cacao	55.03	0.00e+00	1015.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence