iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d024632	Zm00001d024632_T001	Zm00001d024632_T001
Zm00001d024632	Zm00001d024632_T002	Zm00001d024632_T002
Zm00001d024632	Zm00001d024632_T003	Zm00001d024632_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-07	31.9	11	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+ed+    ++++++lp CgHvfha Cl++w  +    +k+ +CP+C+
   Q: 11   CTICYEDLrplsDQHLHCLPaCGHVFHALCLEQWLEYCPGGKKKRTCPVCK 61
           ********888855599999**************555557889999****7 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MTVTAAAWPV CTICYEDLRP LSDQHLHCLP ACGHVFHALC LEQWLEYCPG GKKKRTCPVC 60
KQPCGAAHPP TRLYFSSTGT CPIQACPSPG SASGGADPEA LAAEVARLEQ KAASLGKVVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTGTATTT CGAAATTCAG CGAAATCGCG CGAGACGAAA GCGGGAAGCT CTTATCTTTC 60
CCACCAAATC CAAGCCCATT TGAGGGGCCA GCCACTCCCC GTCGGATGCC GCCGCCGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007330--MIT
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001411	Ailuropoda melanoleuca	36.23	6.00e-07	48.50
IUUC-Atr-002646	Amborella trichopoda	40.69	2.00e-49	189.00
IUUC-Aca-004476	Anolis carolinensis	28.00	1.00e-09	57.40
IUUC-Aly-005550	Arabidopsis lyrata	37.92	3.00e-45	176.00
IUUC-Ath-007362	Arabidopsis thaliana	37.14	1.00e-42	166.00
IUUC-Bta-013084	Bos taurus	37.68	2.00e-07	50.10
IUUC-Bdi-014334	Brachypodium distachyon	56.36	2.00e-150	525.00
IUUC-Bol-015839	Brassica oleracea	39.76	1.00e-46	180.00
IUUC-Bra-016703	Brassica rapa	39.46	3.00e-45	175.00
IUUC-Cja-019856	Callithrix jacchus	36.23	6.00e-07	48.50
IUUC-Cpo-022481	Cavia porcellus	36.23	5.00e-07	48.90
IUUC-Csa-023793	Chlorocebus sabaeus	36.23	4.00e-07	48.90
IUUC-Dre-027984	Danio rerio	26.83	3.00e-09	56.20
IUUC-Dno-029478	Dasypus novemcinctus	36.23	4.00e-07	48.90
IUUC-Ete-033012	Echinops telfairi	36.23	5.00e-07	48.90
IUUC-Eca-034084	Equus caballus	36.23	7.00e-07	48.10
IUUC-Fca-035772	Felis catus	36.23	6.00e-07	48.10
IUUC-Fal-037098	Ficedula albicollis	26.50	4.00e-08	52.40
IUUC-Gmo-038704	Gadus morhua	29.84	1.00e-10	60.80
IUUC-Gac-042636	Gasterosteus aculeatus	24.63	3.00e-09	56.20
IUUC-Gma-042775	Glycine max	34.53	2.00e-54	206.00
IUUC-Ggo-045184	Gorilla gorilla	36.23	5.00e-07	48.50
IUUC-Hsa-046651	Homo sapiens	36.23	6.00e-07	48.50
IUUC-Hvu-047625	Hordeum vulgare	54.93	4.00e-166	577.00
IUUC-Itr-048550	Ictidomys tridecemlineatus	36.23	4.00e-07	49.30
IUUC-Lpe-051238	Leersia perrieri	60.41	1.00e-180	625.00
IUUC-Loc-051999	Lepisosteus oculatus	26.52	1.00e-10	60.50
IUUC-Laf-053347	Loxodonta africana	36.23	6.00e-07	48.50
IUUC-Mtr-058033	Medicago truncatula	31.80	3.00e-60	226.00
IUUC-Mdo-062103	Monodelphis domestica	33.33	1.00e-06	47.40
IUUC-Mmu-064005	Mus musculus	36.23	4.00e-07	48.90
IUUC-Mac-064444	Musa acuminata	47.85	1.00e-66	247.00
IUUC-Mlu-067806	Myotis lucifugus	34.78	1.00e-06	47.00
IUUC-Nle-069123	Nomascus leucogenys	36.23	5.00e-07	48.50
IUUC-Opr-071063	Ochotona princeps	36.23	5.00e-07	48.50
IUUC-Ont-071973	Oreochromis niloticus	28.32	7.00e-11	61.20
IUUC-Ocu-074582	Oryctolagus cuniculus	36.23	8.00e-07	47.80
IUUC-Oba-075193	Oryza barthii	59.94	1.00e-174	605.00
IUUC-Ogl-077006	Oryza glaberrima	60.73	0.00e+00	627.00
IUUC-Ogu-078240	Oryza glumaepatula	58.42	9.00e-177	612.00
IUUC-Oin-079866	Oryza indica	59.74	1.00e-180	625.00
IUUC-Olo-081029	Oryza longistaminata	58.45	1.00e-160	559.00
IUUC-Ome-081703	Oryza meridionalis	60.41	2.00e-177	614.00
IUUC-Oni-082490	Oryza nivara	58.57	3.00e-177	614.00
IUUC-Opu-083315	Oryza punctata	60.25	3.00e-177	614.00
IUUC-Oru-084228	Oryza rufipogon	59.46	0.00e+00	627.00
IUUC-Osa-085981	Oryza sativa	60.25	0.00e+00	649.00
IUUC-Ola-086959	Oryzias latipes	24.34	5.00e-08	51.60
IUUC-Ptr-090768	Pan troglodytes	36.23	6.00e-07	48.50
IUUC-Pan-091880	Papio anubis	36.23	5.00e-07	48.50
IUUC-Psi-093782	Pelodiscus sinensis	36.76	5.00e-07	48.50
IUUC-Ppa-095896	Physcomitrella patens	37.50	2.00e-37	149.00
IUUC-Pfo-096068	Poecilia formosa	26.34	2.00e-09	56.60
IUUC-Pop-099603	Populus trichocarpa	40.84	9.00e-51	194.00
IUUC-Pca-100327	Procavia capensis	36.23	2.00e-07	49.70
IUUC-Ppe-101994	Prunus persica	34.93	4.00e-28	119.00
IUUC-Rno-105799	Rattus norvegicus	36.23	4.00e-07	48.90
IUUC-Sit-109687	Setaria italica	70.91	0.00e+00	741.00
IUUC-Sly-111145	Solanum lycopersicum	41.46	2.00e-57	216.00
IUUC-Stu-112328	Solanum tuberosum	42.86	3.00e-57	215.00
IUUC-Sbi-114760	Sorghum bicolor	78.52	0.00e+00	828.00
IUUC-Ssc-115838	Sus scrofa	36.23	1.00e-07	50.10
IUUC-Tgu-116674	Taeniopygia guttata	40.43	4.00e-07	48.90
IUUC-Tru-117753	Takifugu rubripes	28.36	1.00e-09	57.00
IUUC-Tsy-119416	Tarsius syrichta	36.23	1.00e-06	47.40
IUUC-Tni-120767	Tetraodon nigroviridis	28.15	6.00e-10	58.20
IUUC-Tca-121056	Theobroma cacao	32.91	4.00e-55	208.00
IUUC-Tur-126115	Triticum urartu	56.23	5.00e-172	598.00
IUUC-Ttr-128687	Tursiops truncatus	36.23	2.00e-07	50.10
IUUC-Vvi-130955	Vitis vinifera	41.31	2.00e-50	193.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence