iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098942

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_762606; POPTR_0006s14650g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s14650	POPTR_0006s14650.1	POPTR_0006s14650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-08	35.5	108	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f++g  ++ lp C+H fha C+ +w       + +  CPlCr
   Q: 108  CAVCLSAFEEGeeVRQLPrCKHSFHAPCIDMW------LYSHSDCPLCR 150
           ********55444999999*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVDNITSPLF ESPPPPPPPP PPHKSNLPML YYGLVVVGTA AIVLAVYNLI IIKWCAQRGG 60
RSGQGPNVFT EVTASQSFEH SNSNLPSSFK YKKGKIDGDQ DQGSGYECAV CLSAFEEGEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTAGATA ATATTACAAG CCCTTTATTT GAGTCTCCTC CTCCTCCTCC TCCTCCTCCT 60
CCTCCACACA AATCCAATCT GCCAATGTTA TATTATGGCC TAGTAGTTGT TGGCACAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s14650g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043749	Glycine max	58.65	4.00e-38	149.00
IUUC-Lch-049512	Latimeria chalumnae	43.42	3.00e-12	67.40
IUUC-Mtr-058136	Medicago truncatula	52.87	8.00e-33	132.00
IUUC-Oba-075385	Oryza barthii	43.21	9.00e-16	79.00
IUUC-Oru-084520	Oryza rufipogon	52.54	1.00e-15	78.60
IUUC-Osa-086122	Oryza sativa	51.35	1.00e-17	82.40
IUUC-Ppe-102048	Prunus persica	57.49	2.00e-44	171.00
IUUC-Stu-112205	Solanum tuberosum	51.61	2.00e-38	150.00
IUUC-Tca-121510	Theobroma cacao	67.10	2.00e-55	207.00
IUUC-Tur-126037	Triticum urartu	37.84	1.00e-16	78.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence