iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_038124	EOY31127	EOY31127
TCM_038124	EOY31128	EOY31128
TCM_038124	EOY31132	EOY31132
TCM_038124	EOY31126	EOY31126
TCM_038124	EOY31125	EOY31125
TCM_038124	EOY31129	EOY31129
TCM_038124	EOY31131	EOY31131

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-22	78.8	471	506
UBD/Beta-Prp	1.10e-41	144.0	364	678

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H +sv++laf  ++  l +v+++ D  ikvWD  +g
   Q: 471  HVGSVNDLAFsyPNkQLcIVTCGEDRIIKVWDAVSG 506
           99********997653359*************7665 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdks.llatgsrdgtikvwdvttgkl..................lrslsgheae.........vtavkfspdgkilvtgseDrtikvwdl 81
           + s +++++f+p+++ ll++g  +g i vw+v +g                             +         ++ v +spdg+++  + + ++++v+++
   Q: 364  QGSAVKSMDFHPKTQiLLLVGTNTGDIMVWEVGSGERiahktfkvwdlsacsmplQ--------AslandytvsINRVMWSPDGNLFGVAYSKHIVHVYSY 456
           56778999998877724678999999999999999998999999555555555544........0444555555999999999999999999999999999 PP
   S: 82   stgkcvhtlk...ghedsvlslsfsp.sg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtl 175
             g+ ++      +h  sv +l+fs  ++   +v+ ++dr+i+vwd  +g + + +++gh++ v +++ h ++  + ++s ++D++++ W   +     + 
   Q: 457  HGGDDLRNRLeieAHVGSVNDLAFSYpNKqLCIVTCGEDRIIKVWDAVSGAKQH-IFEGHEAPVYSICPHHKEniQFIFSTATDGKIKAWLYDNVGSRVDY 556
           988888876622255555555666655664889999999999999999999999.9999999999999987775778999999999999977444444444 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlng.htdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn..ssvis 269
                +s + ++++ +g++l s++++++ + + ++    +g + rt+ g  ++   +v+f+  + r++ ++++ s+++Wd+++ +ll+++       +  +
   Q: 557  NA-PGQSSTTMAYSADGTRLFSCGTNKDGESYLVEwnesEGAVKRTYFGlGKRSAGVVQFDTTKSRFLAAGDEFSVKFWDMDNVNLLTSTPADGglPHAPC 656
           44.67788889999999999999999876655555555599999999997778889999999999999999999999999888888877766544433333 PP
   S: 270  vavlsfgdnvlvlgsedskvniw 292
           + + + ++  l+  +ed+ v+i+
   Q: 657  IRF-NKEGTLLAVSTEDNGVKIL 678
           333.4444444444556666654 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKDTVHKLEQ ESGFFFNLRY FEEMVTNGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKRDR AKAVDILVKD LKVFSAFNEE LFKEITHLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCTCGC TTAGCAGAGA ACTCGTGTTT CTTATACTTC AATTCCTTGA TGAAGAGAAA 60
TTTAAAGACA CTGTTCACAA GTATGCTTTA ATCTTTGCTC TCTGTTTACT TTTTTTTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011044--Quino_amine_DH_bsu
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006463	Arabidopsis lyrata	73.67	0.00e+00	1682.00
IUUC-Ath-007634	Arabidopsis thaliana	74.20	0.00e+00	1701.00
IUUC-Bol-015812	Brassica oleracea	73.26	0.00e+00	1713.00
IUUC-Bra-016964	Brassica rapa	73.81	0.00e+00	1709.00
IUUC-Gma-043977	Glycine max	84.67	0.00e+00	1917.00
IUUC-Mtr-058586	Medicago truncatula	83.62	0.00e+00	1915.00
IUUC-Pop-099918	Populus trichocarpa	83.35	0.00e+00	1897.00
IUUC-Ppe-101506	Prunus persica	85.69	0.00e+00	1944.00
IUUC-Sly-111451	Solanum lycopersicum	76.24	0.00e+00	1755.00
IUUC-Stu-112409	Solanum tuberosum	78.45	0.00e+00	1788.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence