iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076198

Ensembl Protein ID

OB03G40600.1

UniProt Accession

J3LSN4; J3LSN4_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G40600	OB03G40600.1	OB03G40600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-34	114.6	223	261
UBD/Beta-Prp	4.50e-55	187.6	122	382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d v+cl+    + +ll sGs+D t kvW++ + ++l 
   Q: 223  HSDAVSCLSPtdGTqGLLYSGSWDRTFKVWRIGDSKCLE 261
           9********98633699**************98888875 PP

UBD/Beta-Prp

   S: 17   kfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dls............................. 82
           +   +++ l tgs+++ i+vw+ ++      +++ ++ v+a+ +s +   + tg++D+ i+vw   ++                             
   Q: 122  AA--KTDTLYTGSDSKNIRVWRKQKD--SGGFKSSSGLVKAIVISGE--RIFTGHQDGKIRVWkgAPKngphkrvgslprlrdflrgslnpsnyvev 212
           44..77899************98884..5699**************9..69************7733367778899999999999999999998888 PP
   S: 83   .tgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......ktgkl 171
            ++  +  + +h+d v +ls    ++  l sGs+drt +vw +   +cle     hd+ vn +v    + l+++Gs+D+tv++W+            
   Q: 213  rKNR-TALWIRHSDAVSCLSPTDgTQGLLYSGSWDRTFKVWRIGDSKCLE-SVVAHDDNVNAIVAAF-DGLVFTGSADGTVKVWRRelqgkgTKHVA 306
           4444.444446**********99788************************.8888888888887655.78****************99999888889 PP
   S: 172  lrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec.vrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           ++tl + ++++v+ l+++   + l  gs dg v++w+ ++  +    l+gh++ v ++++   + +++sgs+D++i++W
   Q: 307  VQTLLK-QEHAVNALAVSAVAPVLYCGSSDGLVNFWEGERHLVhGGVLRGHKKAVFCLAAA--GALVLSGSADNTIFVW 382
           999999.********************************887734679*************..**************** PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MRDSDGEGAG SGLPRSHPSN LPLPAPHSDP NLQFSGTDDD FSNRHSSSSA NGGASPGYYS 60
DYPSSFSGEC SPYNMSPWNQ TMASPWSHHS EASGMGGAPA MAPGTSLIAS LVREEGHIYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAGATT CCGACGGCGA AGGGGCCGGC AGCGGCCTCC CGCGCTCGCA CCCGTCGAAC 60
CTCCCGCTGC CGGCGCCGCA CTCCGACCCG AACCTCCAGT TCTCCGGCAC CGACGATGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

obr:102711240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001063	Aegilops tauschii	36.81	1.00e-41	163.00
IUUC-Atr-002457	Amborella trichopoda	61.16	3.00e-150	524.00
IUUC-Ath-006909	Arabidopsis thaliana	57.08	5.00e-138	483.00
IUUC-Bdi-014024	Brachypodium distachyon	87.30	0.00e+00	801.00
IUUC-Bol-015603	Brassica oleracea	59.53	3.00e-118	417.00
IUUC-Bra-017186	Brassica rapa	59.26	5.00e-138	483.00
IUUC-Gma-043481	Glycine max	58.22	4.00e-136	476.00
IUUC-Hvu-047445	Hordeum vulgare	84.63	0.00e+00	744.00
IUUC-Lpe-051623	Leersia perrieri	93.57	0.00e+00	785.00
IUUC-Mtr-057641	Medicago truncatula	61.87	7.00e-139	486.00
IUUC-Mac-065282	Musa acuminata	57.97	1.00e-112	398.00
IUUC-Oba-075783	Oryza barthii	94.27	0.00e+00	874.00
IUUC-Ogl-077280	Oryza glaberrima	94.27	0.00e+00	874.00
IUUC-Ogu-078924	Oryza glumaepatula	95.30	0.00e+00	895.00
IUUC-Oin-079931	Oryza indica	94.07	0.00e+00	871.00
IUUC-Olo-080744	Oryza longistaminata	92.51	0.00e+00	664.00
IUUC-Ome-081447	Oryza meridionalis	54.40	5.00e-94	337.00
IUUC-Oni-082948	Oryza nivara	94.07	0.00e+00	871.00
IUUC-Opu-083881	Oryza punctata	94.27	0.00e+00	867.00
IUUC-Oru-084999	Oryza rufipogon	94.07	0.00e+00	871.00
IUUC-Osa-085749	Oryza sativa	94.07	0.00e+00	871.00
IUUC-Ppa-095309	Physcomitrella patens	42.64	2.00e-76	278.00
IUUC-Pop-099113	Populus trichocarpa	59.51	2.00e-142	498.00
IUUC-Ppe-101355	Prunus persica	62.00	7.00e-142	496.00
IUUC-Sit-109859	Setaria italica	88.26	0.00e+00	724.00
IUUC-Sly-111340	Solanum lycopersicum	58.62	2.00e-130	457.00
IUUC-Stu-112301	Solanum tuberosum	61.00	4.00e-136	477.00
IUUC-Sbi-114260	Sorghum bicolor	86.00	0.00e+00	764.00
IUUC-Tca-121208	Theobroma cacao	59.40	3.00e-144	504.00
IUUC-Tae-122837	Triticum aestivum	77.63	0.00e+00	722.00
IUUC-Tur-126539	Triticum urartu	85.02	4.00e-144	503.00
IUUC-Vvi-131140	Vitis vinifera	62.58	2.00e-144	504.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence