iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076033

Ensembl Protein ID

OB01G54750.1

UniProt Accession

J3L8B9; J3L8B9_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G54750	OB01G54750.1	OB01G54750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-25	86.5	289	323
E3 adaptor/Cullin RING/APC_C/CDC20	2.90e-142	474.1	155	456

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH ++v++l++ +d + l+sG++D+++ vW+ r++
   Q: 289  GHRSEVCGLKWsHDdRELASGGNDNQLLVWNQRSQ 323
           8***********55599**************8776 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsa 97
           p+kvldap+l+ddfylnL+dWss+n+lav+Lg++vylwsa++++v+kl+dl ++d+v++v+w++eg++la+Gt  g v+i+D +++k++r++ gh++
   Q: 155  PHKVLDAPSLQDDFYLNLVDWSSQNMLAVGLGNCVYLWSASNSKVTKLCDLGPRDSVCAVHWTREGSYLAIGTGLGDVQIWDSSRCKRIRNMGGHQT 251
           689********************************************************************************************** PP
   S: 98   rvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqksl 194
           r g L+W + +lssGsrd++il++d+rv+   +s++++h++evCGlkw++d+++LasGGnDn++ vw+++s++P+ + +eh+aavkaiawsP+q++l
   Q: 252  RTGVLAWSSRILSSGSRDKNILQHDIRVPSDYISKFTGHRSEVCGLKWSHDDRELASGGNDNQLLVWNQRSQQPVLRLTEHTAAVKAIAWSPHQQGL 348
           ************************************************************************************************* PP
   S: 195  LasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetl 291
           LasGGGtaDrci+fwnt++g++l+++dtgsqvc+l+w k+ +elvsthG+++n+i++wkyps+skva+l+gh++Rvl+la+spdg++ivt+agDetl
   Q: 349  LASGGGTADRCIRFWNTVNGNMLNSVDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMSKVATLTGHTLRVLYLAMSPDGQTIVTGAGDETL 445
           ************************************************************************************************* PP
   S: 292  rfwklfdkkka 302
           rfw++f + k+
   Q: 446  RFWNIFPSMKT 456
           ******87665 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAADASPKAA PPRLNAXXXX XRGARPAPAV ASPARLLLDV PKTPSPSKTT YSDRFIPCRS 60
SSRLHNFALL DRASPGSGDD APYSRLLRAE IFGPDSPSPA PSSPNTNLFR FKTDHPSPKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG ACGCGTCCCC CAAGGCGGCG CCGCCGCGCC TCAACGCNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003035	Amborella trichopoda	72.67	0.00e+00	657.00
IUUC-Aly-006009	Arabidopsis lyrata	69.34	5.00e-175	606.00
IUUC-Ath-007167	Arabidopsis thaliana	73.00	1.00e-176	611.00
IUUC-Bdi-015033	Brachypodium distachyon	83.78	0.00e+00	733.00
IUUC-Bol-016159	Brassica oleracea	71.43	5.00e-175	606.00
IUUC-Bra-017745	Brassica rapa	71.27	2.00e-174	604.00
IUUC-Cel-018472	Caenorhabditis elegans	63.58	2.00e-119	422.00
IUUC-Cre-022944	Chlamydomonas reinhardtii	45.17	4.00e-101	360.00
IUUC-Gma-043563	Glycine max	73.14	0.00e+00	630.00
IUUC-Hvu-047486	Hordeum vulgare	92.88	2.00e-167	580.00
IUUC-Kpa-049239	Komagataella pastoris	59.35	1.00e-117	415.00
IUUC-Lpe-051568	Leersia perrieri	88.89	0.00e+00	721.00
IUUC-Mtr-057760	Medicago truncatula	69.93	0.00e+00	625.00
IUUC-Mac-064942	Musa acuminata	77.11	0.00e+00	700.00
IUUC-Oba-075417	Oryza barthii	93.26	0.00e+00	649.00
IUUC-Ogl-077441	Oryza glaberrima	94.14	0.00e+00	816.00
IUUC-Ogu-078877	Oryza glumaepatula	91.61	0.00e+00	799.00
IUUC-Oin-079461	Oryza indica	92.76	0.00e+00	758.00
IUUC-Olo-080716	Oryza longistaminata	92.26	0.00e+00	731.00
IUUC-Ome-081663	Oryza meridionalis	92.74	0.00e+00	785.00
IUUC-Oni-083097	Oryza nivara	91.21	0.00e+00	779.00
IUUC-Opu-083464	Oryza punctata	91.82	0.00e+00	783.00
IUUC-Oru-084848	Oryza rufipogon	91.21	0.00e+00	779.00
IUUC-Osa-085451	Oryza sativa	94.14	0.00e+00	816.00
IUUC-Ppa-095366	Physcomitrella patens	63.94	5.00e-172	596.00
IUUC-Pop-099269	Populus trichocarpa	75.93	0.00e+00	637.00
IUUC-Ppe-101285	Prunus persica	73.83	0.00e+00	630.00
IUUC-Pgr-103466	Puccinia graminis	60.25	8.00e-108	383.00
IUUC-Ptt-103888	Puccinia triticina	55.87	4.00e-99	354.00
IUUC-Sja-107900	Schizosaccharomyces japonicus	48.43	2.00e-114	404.00
IUUC-Spo-108369	Schizosaccharomyces pombe	55.48	9.00e-109	386.00
IUUC-Smo-109041	Selaginella moellendorffii	63.50	1.00e-172	598.00
IUUC-Sit-110550	Setaria italica	84.39	0.00e+00	784.00
IUUC-Sly-111395	Solanum lycopersicum	75.29	0.00e+00	640.00
IUUC-Stu-112356	Solanum tuberosum	75.74	0.00e+00	644.00
IUUC-Sbi-114386	Sorghum bicolor	83.26	0.00e+00	736.00
IUUC-Sre-115222	Sporisorium reilianum	63.38	7.00e-122	430.00
IUUC-Tca-121682	Theobroma cacao	76.69	0.00e+00	643.00
IUUC-Tae-123028	Triticum aestivum	83.75	0.00e+00	739.00
IUUC-Tur-126545	Triticum urartu	82.97	2.00e-151	527.00
IUUC-Uma-129555	Ustilago maydis	63.08	1.00e-121	429.00
IUUC-Vpa-130775	Vicugna pacos	37.00	3.00e-54	204.00
IUUC-Vvi-131748	Vitis vinifera	75.57	0.00e+00	648.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence