iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044268

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000851

Gene Name

LOC100799686; GLYMA_18G171100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G36883	GLYMA18G36883.1	GLYMA18G36883.1
GLYMA18G36883	GLYMA18G36883.2	GLYMA18G36883.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-22	80.7	537	568
UBD/Beta-Prp	1.50e-40	140.9	495	653

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H++ +t+++f ++   l+++s D+++++WD++
   Q: 537  HKSVITDVRFrPNsSQLATASTDKSVRLWDTT 568
           9**********77799**************76 PP

UBD/Beta-Prp

   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltgghtdsvys 185
            +++v++++fs +g++l+s+++d  + +w+++t +  + t ++h++v++ v++ p+++ l+++s+D+ vrlWd  +  ++l++ +g h +++ s
   Q: 495  RNSKVTCCHFSSDGKWLASAGDDMKVDIWNMDTLETES-TPAEHKSVITDVRFRPNSSQLATASTDKSVRLWDTtNPSRCLQEYSG-HSSAIMS 586
           6899*********************************9.**********************************955678******9.******* PP
   S: 186  lsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg 254
           l+f++++ + +  ++  + +++w++ +++c r  +g +++v+   f p+  r++ ++sD+ ++i+d++s+
   Q: 587  LDFHPKKtELFCFCDGENEIRYWNINSSTCTRVTKGVSAQVR---FQPRLGRYLAAASDKGVSIFDVESD 653
           *****99566789*************************9887...7777788888888********9986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MKSTMAQNQS NWEADKMLDV YIYDYLMKRK LHAAAKAFVT EGKVSTDPVA IDAPGGFLYE 60
WWSVFWDIFI SRTNEKHSEA AAAYIETQQT KAREQQLQMQ QLQLMQQRSA QLQRRDPNHP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGCATTAA ATAACACTGT ACGTTTCCCT TCTAAATATC TCTCATCGTG GATTCTCTCT 60
CCACTTGTGC CAAAAACTCA AGCGTGGGTT GTTGCACTTC ACTCGCACTC AAATTAGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-058727	Medicago truncatula	77.28	0.00e+00	1125.00
IUUC-Pop-099999	Populus trichocarpa	75.10	0.00e+00	1069.00
IUUC-Ppe-101584	Prunus persica	76.34	0.00e+00	1077.00
IUUC-Sly-111127	Solanum lycopersicum	69.13	0.00e+00	973.00
IUUC-Stu-112404	Solanum tuberosum	69.77	0.00e+00	980.00
IUUC-Tca-121725	Theobroma cacao	71.66	0.00e+00	999.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence