iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099236

UUCD1 version

UUC-PoT-00940

Ensembl Protein ID

POPTR_0003s18290.1

UniProt Accession

A9PBV7; A9PBV7_POPTR

Genbank Protein ID

ABK93860.1; EEE79716.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

EF145726; CM000339

Gene Name

POPTRDRAFT_817588; POPTR_0003s18290g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s18290	POPTR_0003s18290.1	POPTR_0003s18290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.80e-09	36.7	116	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f+dg  ++ l+ C+H fha+C+ +w       s + +CP+Cr
   Q: 116  CPVCLSVFSDGeaVKQLSvCKHSFHASCIDMW------LSSNSNCPVCR 158
           ********77655666667*************......999999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEHPPTIFMV PEPPPFPAPP RSVDLAPLEF ILAFIAVIAV PALIYTFFFS IKCPPGPFRR 60
RRRHRSSSSI ISETLSVSEI VDTDDLNGTT SGDQKERVSD VKFQKDTHLQ DVGSECPVCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCATCTGAA GTAATAATAA TAAGCTCACA AAAACCCTAC AGCTATTTCC ATCCTTTCAT 60
TGGAGTAATA GTTATCAATC GTCACTGTCA TCACATGGAG CATCCACCAA CCATCTTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s18290g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015844	Brassica oleracea	45.19	2.00e-20	92.00
IUUC-Bra-018054	Brassica rapa	48.18	1.00e-24	105.00
IUUC-Gma-043305	Glycine max	44.51	3.00e-32	131.00
IUUC-Mtr-057692	Medicago truncatula	48.07	1.00e-39	155.00
IUUC-Ppe-101168	Prunus persica	53.33	2.00e-45	174.00
IUUC-Pgr-103468	Puccinia graminis	38.98	1.00e-08	53.50
IUUC-Sce-106307	Saccharomyces cerevisiae	38.10	3.00e-08	52.00
IUUC-Sly-111711	Solanum lycopersicum	54.46	4.00e-23	99.80
IUUC-Stu-112454	Solanum tuberosum	53.47	7.00e-23	99.00
IUUC-Tca-120953	Theobroma cacao	53.76	3.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence