iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114453

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G231400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g027410	Sb10g027410.1	Sb10g027410.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.00e-09	37.4	130	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C + ++dg    +++ CgH+fha C++ w       +++++CP+Cr
   Q: 130  CAVCISVLRDGetvRRLTACGHAFHARCINGW------LRGHATCPICR 172
           ******9966654344677*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDDAVRTADP STARWGRRST LLLMWSLAEL VTILVYAFAG RLWGFVVAGV LLALVFIFTC 60
YYYLRRTRGS EESTTVGQQQ QNEVNGDGVG VGLSQGDIEA IPAFEYCAAG ADAGGGSGSE 120

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Nucleotide Sequence
(Fasta)

ATGGACGACG CAGTGCGGAC TGCTGACCCA AGCACTGCGC GGTGGGGCCG CCGCTCGACT 60
CTCCTTCTGA TGTGGTCGCT GGCCGAGCTC GTGACCATCT TGGTGTACGC GTTCGCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g027410

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015844	Brassica oleracea	60.00	2.00e-15	75.10
IUUC-Bra-018054	Brassica rapa	60.00	9.00e-16	75.90
IUUC-Gma-043305	Glycine max	56.90	5.00e-16	76.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence