iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114201

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G125300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g020200	Sb07g020200.1	Sb07g020200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	32.9	370	415

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgpl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++df+  ++ +lpCgH f+ +C+q w +   ss k  +CPlC+
   Q: 370  CVICWTDFSS-TRgILPCGHRFCYSCIQGWADCLASSGKVSTCPLCK 415
           ********77.44479******************************7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPIDGMRSVV ATVSGYHGEE RHRLVNLIAE TGASYVGSMS RSITHLVCWR LEGKKYDIAR 60
KLGTRVVSHR WFMECLSEGR RLPEDPYLMV SGEEAGPVPE LPARSRTQRK KNAIMEDRIF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGATCG ACGGGATGAG GTCCGTGGTC GCGACGGTGA GCGGCTACCA CGGCGAGGAG 60
CGGCACAGGC TCGTGAACCT CATCGCGGAG ACCGGCGCCA GCTACGTAGG ATCCATGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001357--BRCT_dom
IPR011011--Znf_FYVE_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50172--BRCT
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12738--PTCB-BRCT
PF13639--zf-RING_2

SMART

SM00292--BRCT
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_07g020200

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000133	Aegilops tauschii	57.31	5.00e-119	421.00
IUUC-Atr-003095	Amborella trichopoda	36.33	3.00e-76	278.00
IUUC-Ang-009518	Aspergillus niger	31.13	2.00e-09	57.40
IUUC-Bdi-014816	Brachypodium distachyon	54.82	7.00e-165	573.00
IUUC-Cre-022845	Chlamydomonas reinhardtii	29.49	7.00e-06	40.80
IUUC-Gma-043447	Glycine max	50.26	3.00e-51	195.00
IUUC-Lpe-050685	Leersia perrieri	49.12	6.00e-118	416.00
IUUC-Loc-052633	Lepisosteus oculatus	42.86	2.00e-07	50.10
IUUC-Mtr-058640	Medicago truncatula	39.20	5.00e-87	313.00
IUUC-Oba-075202	Oryza barthii	60.85	2.00e-174	604.00
IUUC-Obr-076294	Oryza brachyantha	58.92	7.00e-169	586.00
IUUC-Ogl-077543	Oryza glaberrima	60.97	8.00e-176	609.00
IUUC-Oin-079950	Oryza indica	56.38	3.00e-126	445.00
IUUC-Olo-080275	Oryza longistaminata	60.04	2.00e-173	601.00
IUUC-Ome-081398	Oryza meridionalis	59.93	8.00e-177	612.00
IUUC-Oru-084583	Oryza rufipogon	49.07	2.00e-120	424.00
IUUC-Osa-086181	Oryza sativa	59.70	7.00e-170	589.00
IUUC-Pop-099757	Populus trichocarpa	37.76	9.00e-85	306.00
IUUC-Smo-109143	Selaginella moellendorffii	53.12	7.00e-29	120.00
IUUC-Sit-110027	Setaria italica	71.95	0.00e+00	724.00
IUUC-Stu-112802	Solanum tuberosum	38.96	8.00e-84	303.00
IUUC-Tca-121547	Theobroma cacao	37.04	4.00e-85	308.00
IUUC-Tae-124541	Triticum aestivum	57.76	2.00e-123	435.00
IUUC-Tur-126024	Triticum urartu	54.95	4.00e-94	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence