iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006230

UUCD1 version

UUC-ArL-01139

Ensembl Protein ID

fgenesh1_pm.C_scaffold_8001028

UniProt Accession

D7MSX1; D7MSX1_ARALL

Genbank Protein ID

EFH42227.1

Protein Name

Ubiquitin-conjugating enzyme 10

Genbank Nucleotide ID

GL348720

Gene Name

UBC10; ARALYDRAFT_331685

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_8001028	fgenesh1_pm.C_scaffold_8001028	fgenesh1_pm.C_scaffold_8001028

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.50e-56	190.0	5	139
UBD/UBC-like/UBD_UBC	2.80e-74	248.4	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenG 79
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+++pY+ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNG 82
           899*********************.9***************************************************** PP
   S: 80   kvClsilkeeekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           ++Cl+ilk  e+Wspal++++vllsi+sll++pnp++pl  e+a+++k+++++y++++r
   Q: 83   SICLDILK--EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR 139
           *******9..*********************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngs 79
           ri kelkdl++d+++ +sa++v +d+f+++ati+gp++spy ggvf +ti++p dypfkppkvaf tk++hpninsngs
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGS 83
           899**************************************************************************** PP
   S: 80   icldilrsqwsaaltlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           icldil++qws+alt+skvlls+csll+d++pddplv+eia++yktdk+ky+ +ar wt
   Q: 84   ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWT 142
           **********************************************************8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SESPYAGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCGA AGCGGATCTT GAAGGAATTG AAGGATCTTC AGAAGGATCC ACCTACATCA 60
TGTAGCGCAG GTACTTGTTT TGTCTTTCGA TTTTGAGATT TTGAGGTTTC TCTGAGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_331685

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002861	Amborella trichopoda	97.30	9.00e-85	304.00
IUUC-Ath-007647	Arabidopsis thaliana	100.00	3.00e-86	309.00
IUUC-Bol-016243	Brassica oleracea	98.65	2.00e-85	306.00
IUUC-Gma-043923	Glycine max	97.97	1.00e-84	303.00
IUUC-Lch-050109	Latimeria chalumnae	77.55	1.00e-68	251.00
IUUC-Mac-065077	Musa acuminata	96.62	6.00e-84	301.00
IUUC-Ppa-095564	Physcomitrella patens	97.30	6.00e-84	301.00
IUUC-Ppe-101688	Prunus persica	97.97	5.00e-85	305.00
IUUC-Sly-110885	Solanum lycopersicum	97.30	2.00e-84	303.00
IUUC-Stu-111944	Solanum tuberosum	97.30	2.00e-84	303.00
IUUC-Tca-121008	Theobroma cacao	97.30	3.00e-84	302.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence