iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043375

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000840

Gene Name

LOC100785141; GLYMA_07G188400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA07G30760	GLYMA07G30760.1	GLYMA07G30760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.70e-30	104.1	5	72

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqaw 68
           +p++f+CpIsle+M+dPv+l+sG+t+drssI++wl+ g++tcP+t+ pl ++  l+Pn++lr+li+++
   Q: 5    LPDHFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLpDHPALIPNHALRSLISNY 72
           79***********************************************667778**********987 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MDSHLPDHFK CPISLEIMSD PVILSSGHTF DRSSIQRWLD AGHRTCPITK LPLPDHPALI 60
PNHALRSLIS NYAFLSPLHH TVSQPEALIS TLASNSSSSD SKIEALKHLT RLSKRDSAFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATCCCTGT GATGAAGCTA AAAATGAACC ATGGCGAAAC GAAAGGGAAC TCATTAGAGG 60
CCTCAAAAAC CTCATAAACC CTCTCTCTCT GTCTCAGTCA CACATTCAAG AAGGGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100785141

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002776	Amborella trichopoda	52.09	3.00e-73	268.00
IUUC-Aly-006175	Arabidopsis lyrata	60.05	9.00e-109	386.00
IUUC-Ath-006926	Arabidopsis thaliana	60.05	3.00e-107	381.00
IUUC-Bol-015331	Brassica oleracea	61.20	2.00e-92	332.00
IUUC-Bra-017717	Brassica rapa	60.00	5.00e-84	304.00
IUUC-Hvu-047263	Hordeum vulgare	47.02	3.00e-30	124.00
IUUC-Kpa-049392	Komagataella pastoris	37.88	6.00e-09	54.70
IUUC-Mtr-058590	Medicago truncatula	72.73	3.00e-134	471.00
IUUC-Mac-065427	Musa acuminata	46.33	4.00e-25	108.00
IUUC-Pop-099846	Populus trichocarpa	60.92	3.00e-109	388.00
IUUC-Ppe-101638	Prunus persica	65.95	2.00e-125	442.00
IUUC-Sly-111598	Solanum lycopersicum	62.98	2.00e-104	372.00
IUUC-Stu-112509	Solanum tuberosum	62.81	2.00e-100	358.00
IUUC-Tca-121293	Theobroma cacao	67.86	8.00e-130	456.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence