iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057686

Ensembl Protein ID

KEH44162

UniProt Accession

G8A269; G8A269_MEDTR

Genbank Protein ID

AFK44714.1; KEH44162.1

Protein Name

C3HC4-type RING zinc finger protein

Genbank Nucleotide ID

BT144920; CM001217

Gene Name

MTR_1g109280

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g109280	KEH44162	KEH44162

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-08	35.5	95	137

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++ f++g  ++ lpC Hvfh++Cl+ w     + + +f+CPlCr
   Q: 95   CVFCQSNFENGdhVRKLPCRHVFHRHCLNGW-----FHRFNFNCPLCR 137
           9*******55555999***************.....7888*******8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGLQSQLNDV SSDSIPLLVL MHIATCVNYI RSMLLNFLQS IGLSRLQTDQ IVDDHFIAAV 60
GSGLAGLIML SDQLSLNNQF FYKYEDAASA DNHRCVFCQS NFENGDHVRK LPCRHVFHRH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAAACACCT AATTGATTGA TTAGTATCCT CTCTCTTAGC CAAACGAATC ATACATAATT 60
AGAGTTTCCC ACATCACACG TCATACCCTC GTCTCGTTTA TATACTCTGA TAGAACCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g109280

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002667	Amborella trichopoda	35.43	5.00e-24	103.00
IUUC-Aly-005399	Arabidopsis lyrata	49.04	2.00e-33	134.00
IUUC-Ath-007573	Arabidopsis thaliana	50.31	4.00e-38	149.00
IUUC-Bol-015550	Brassica oleracea	46.43	1.00e-30	124.00
IUUC-Bra-017124	Brassica rapa	49.29	4.00e-31	126.00
IUUC-Gma-043050	Glycine max	67.86	7.00e-62	228.00
IUUC-Mac-065273	Musa acuminata	43.81	2.00e-22	97.40
IUUC-Oin-079304	Oryza indica	47.06	1.00e-08	52.00
IUUC-Osa-086086	Oryza sativa	47.06	1.00e-08	52.00
IUUC-Pop-099326	Populus trichocarpa	51.79	4.00e-32	129.00
IUUC-Ppe-101263	Prunus persica	45.09	2.00e-22	97.80
IUUC-Sit-110184	Setaria italica	42.65	3.00e-11	60.10
IUUC-Sly-111821	Solanum lycopersicum	50.00	8.00e-45	171.00
IUUC-Stu-112683	Solanum tuberosum	49.10	2.00e-43	167.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence