iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114791

UUCD1 version

UUC-SoB-01073

Ensembl Protein ID

Sb07g007520.1

UniProt Accession

C5YJF4; C5YJF4_SORBI

Genbank Protein ID

EES13583.1; KXG24795.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766; CM000766

Gene Name

SORBI_007G086900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g007520	Sb07g007520.1	Sb07g007520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-07	32.2	309	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++  + ++  + C+H +h++C+q+w     +++k++ CP+C+
   Q: 309  CIICQEEYssDVEVAKMACKHYYHTTCIQQW-----LQQKNW-CPICK 350
           ******996533366688*************.....566666.****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDETMGRRTV SGLLVTKGGS ILVFREESPR HKATTCCTRL GCSSKLFPNK DRKTRRASME 60
TSAHQRSQVL RKSNRMSPQG SISYDRSTSR NTASTFGETD NIPRRKENPG CDLLARLKER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCAGACGCC TCTCTCTCTC TCTCCTCTCT CTCTCTCTCT AAATCGGGTA CAATTGCTTC 60
GTTCCTCTCC TCACCGAGGA CGGCGGAGAG AGAGGCGGAG GAAAGGTCCG GCCGGCGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_07g007520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002613	Amborella trichopoda	53.08	3.00e-35	142.00
IUUC-Bdi-014541	Brachypodium distachyon	51.82	8.00e-86	309.00
IUUC-Lpe-050702	Leersia perrieri	61.45	6.00e-107	379.00
IUUC-Mac-065556	Musa acuminata	58.62	5.00e-37	148.00
IUUC-Oba-075205	Oryza barthii	61.00	3.00e-105	374.00
IUUC-Obr-076046	Oryza brachyantha	60.22	4.00e-103	367.00
IUUC-Ogl-077015	Oryza glaberrima	60.56	9.00e-103	365.00
IUUC-Ogu-078330	Oryza glumaepatula	61.00	3.00e-105	374.00
IUUC-Olo-080444	Oryza longistaminata	60.28	2.00e-102	364.00
IUUC-Oni-083015	Oryza nivara	60.45	1.00e-104	372.00
IUUC-Opu-083973	Oryza punctata	59.17	4.00e-103	367.00
IUUC-Oru-084736	Oryza rufipogon	60.45	1.00e-104	371.00
IUUC-Osa-085638	Oryza sativa	60.28	2.00e-104	371.00
IUUC-Sit-110673	Setaria italica	74.10	6.00e-132	462.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence