iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-064928

Ensembl Protein ID

GSMUA_Achr11P05980_001

UniProt Accession

M0RPS8; M0RPS8_MUSAM

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr11G05980_001	GSMUA_Achr11T05980_001	GSMUA_Achr11P05980_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-22	77.9	142	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           ++++cla  d +++ sGs+D+t+kvW++++ ++l 
   Q: 142  GRISCLAV-DgGFVYSGSWDKTLKVWRVSDLKCLE 175
           5799*999.66*******************99986 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MLTPLLEKSK SNRSSSDSQN IPTPTPPQVH HCIPCAGSGA GRHKSLAVLS GHVGSVSCLA 60
LCGEFVLSAS HGKDIIVWQQ PDLRRFARFG HGSGSVKALV TVGSRIFSGH QDGRIRVWKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTAACCC CACTGCTGGA GAAATCCAAG TCGAACCGCA GCAGCAGCGA CTCCCAAAAC 60
ATACCAACCC CAACACCACC GCAAGTTCAT CACTGCATTC CCTGCGCCGG CTCCGGTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	63.29	5.00e-102	363.00
IUUC-Aly-005620	Arabidopsis lyrata	62.64	3.00e-104	371.00
IUUC-Ath-006729	Arabidopsis thaliana	60.97	1.00e-103	369.00
IUUC-Bdi-014229	Brachypodium distachyon	53.16	2.00e-83	301.00
IUUC-Bol-015680	Brassica oleracea	58.71	8.00e-97	346.00
IUUC-Bra-017666	Brassica rapa	56.72	7.00e-97	346.00
IUUC-Gma-043773	Glycine max	63.17	8.00e-110	389.00
IUUC-Hvu-047162	Hordeum vulgare	52.16	1.00e-56	212.00
IUUC-Lpe-050845	Leersia perrieri	54.87	3.00e-77	281.00
IUUC-Mtr-058525	Medicago truncatula	63.19	3.00e-107	381.00
IUUC-Oba-075989	Oryza barthii	56.45	3.00e-92	331.00
IUUC-Obr-076522	Oryza brachyantha	57.74	3.00e-93	334.00
IUUC-Ogl-077747	Oryza glaberrima	55.65	2.00e-91	328.00
IUUC-Ogu-078306	Oryza glumaepatula	57.40	1.00e-90	326.00
IUUC-Oin-079397	Oryza indica	57.10	2.00e-90	325.00
IUUC-Olo-080627	Oryza longistaminata	58.62	6.00e-65	240.00
IUUC-Ome-081295	Oryza meridionalis	56.80	6.00e-90	323.00
IUUC-Oni-082259	Oryza nivara	55.65	2.00e-91	328.00
IUUC-Opu-083686	Oryza punctata	58.98	6.00e-93	333.00
IUUC-Oru-084598	Oryza rufipogon	57.10	2.00e-90	325.00
IUUC-Osa-085705	Oryza sativa	55.65	1.00e-89	323.00
IUUC-Pop-099167	Populus trichocarpa	67.27	2.00e-119	421.00
IUUC-Ppe-101179	Prunus persica	63.61	3.00e-118	417.00
IUUC-Sit-109966	Setaria italica	58.48	1.00e-86	312.00
IUUC-Sly-111222	Solanum lycopersicum	66.17	4.00e-112	397.00
IUUC-Stu-112315	Solanum tuberosum	66.47	1.00e-118	419.00
IUUC-Sbi-114323	Sorghum bicolor	52.37	4.00e-82	298.00
IUUC-Tca-121448	Theobroma cacao	65.80	4.00e-117	414.00
IUUC-Tae-123485	Triticum aestivum	55.04	3.00e-85	308.00
IUUC-Vvi-131470	Vitis vinifera	67.06	3.00e-119	421.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence