iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mga-059279

Ensembl Protein ID

ENSMGAP00000003938.1

UniProt Accession

G1MYC5; G1MYC5_MELGA

Protein Name

Uncharacterized protein

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000004152.1	ENSMGAT00000004648.1	ENSMGAP00000003938.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-16	58.5	51	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ vt++++ ++ ++lv+++ D + +vW l
   Q: 51   HNGQVTGIDWaPEsNRLVTCGTDRNAYVWTL 81
           9**********888***************75 PP

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

MAYHSFLLEP ISCHAWNKDR TQIALCPNNH EVHIYRKDGA KWSKVHELKE HNGQVTGIDW 60
APESNRLVTC GTDRNAYVWT LKGNVWKPTL VILRINRAAR CVKWSPKENK FAVGSGSRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGCCAGCA ACTCTCAGCG CTCACTGCGC TCTGCCCGGG CTTGGCTGTT CGTGTCGACT 60
GCCCAGAGTC CACGAACTGC CCTGCCCTGC TCTGCTCTGC GAGGTAAGGA GTGGGAGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

mgp:100539832

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	44.48	9.00e-64	236.00
IUUC-Aml-001709	Ailuropoda melanoleuca	86.44	0.00e+00	682.00
IUUC-Aly-005532	Arabidopsis lyrata	42.16	3.00e-81	295.00
IUUC-Ath-006683	Arabidopsis thaliana	43.24	1.00e-81	296.00
IUUC-Ame-011512	Astyanax mexicanus	82.34	0.00e+00	665.00
IUUC-Bta-012442	Bos taurus	86.25	0.00e+00	678.00
IUUC-Bdi-014632	Brachypodium distachyon	42.12	6.00e-78	283.00
IUUC-Bol-016274	Brassica oleracea	42.86	2.00e-83	302.00
IUUC-Bra-016790	Brassica rapa	41.78	5.00e-82	297.00
IUUC-Cja-019899	Callithrix jacchus	87.67	0.00e+00	693.00
IUUC-Cfa-020067	Canis familiaris	87.10	0.00e+00	686.00
IUUC-Cpo-022461	Cavia porcellus	87.37	0.00e+00	689.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.71	3.00e-35	140.00
IUUC-Csa-023277	Chlorocebus sabaeus	83.60	0.00e+00	659.00
IUUC-Dre-028141	Danio rerio	80.98	0.00e+00	650.00
IUUC-Dor-030559	Dipodomys ordii	87.10	0.00e+00	690.00
IUUC-Ete-032299	Echinops telfairi	87.10	0.00e+00	692.00
IUUC-Eca-033593	Equus caballus	86.06	0.00e+00	676.00
IUUC-Fca-036254	Felis catus	87.37	0.00e+00	690.00
IUUC-Fal-037453	Ficedula albicollis	95.96	0.00e+00	737.00
IUUC-Gmo-038471	Gadus morhua	71.77	2.00e-165	574.00
IUUC-Gga-040898	Gallus gallus	99.73	0.00e+00	767.00
IUUC-Gac-042236	Gasterosteus aculeatus	74.67	3.00e-177	613.00
IUUC-Gma-042803	Glycine max	43.32	9.00e-83	300.00
IUUC-Ggo-045355	Gorilla gorilla	72.12	4.00e-157	546.00
IUUC-Hsa-046623	Homo sapiens	87.10	0.00e+00	688.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	88.44	0.00e+00	696.00
IUUC-Lch-049679	Latimeria chalumnae	83.15	0.00e+00	662.00
IUUC-Lpe-050869	Leersia perrieri	41.78	1.00e-78	286.00
IUUC-Loc-052140	Lepisosteus oculatus	83.42	0.00e+00	650.00
IUUC-Laf-054287	Loxodonta africana	83.78	0.00e+00	659.00
IUUC-Meu-056302	Macropus eugenii	90.51	0.00e+00	713.00
IUUC-Mtr-057659	Medicago truncatula	42.63	3.00e-86	311.00
IUUC-Mmr-060752	Microcebus murinus	87.53	0.00e+00	677.00
IUUC-Mdo-062836	Monodelphis domestica	85.37	0.00e+00	668.00
IUUC-Mmu-064099	Mus musculus	85.90	0.00e+00	681.00
IUUC-Mac-064632	Musa acuminata	43.05	2.00e-81	295.00
IUUC-Mpu-066247	Mustela putorius furo	86.56	0.00e+00	675.00
IUUC-Mlu-067571	Myotis lucifugus	87.87	0.00e+00	697.00
IUUC-Nle-069492	Nomascus leucogenys	75.81	6.00e-161	559.00
IUUC-Ont-071316	Oreochromis niloticus	78.36	1.00e-179	621.00
IUUC-Oan-072692	Ornithorhynchus anatinus	90.51	0.00e+00	715.00
IUUC-Ocu-074187	Oryctolagus cuniculus	85.75	0.00e+00	671.00
IUUC-Oba-075379	Oryza barthii	43.01	1.00e-79	289.00
IUUC-Obr-076404	Oryza brachyantha	42.31	1.00e-79	289.00
IUUC-Ogl-077409	Oryza glaberrima	40.60	1.00e-73	269.00
IUUC-Ogu-078759	Oryza glumaepatula	43.01	2.00e-79	289.00
IUUC-Oin-079118	Oryza indica	43.05	3.00e-80	291.00
IUUC-Olo-081055	Oryza longistaminata	43.57	2.00e-70	258.00
IUUC-Ome-081281	Oryza meridionalis	43.01	2.00e-79	289.00
IUUC-Oni-083043	Oryza nivara	43.01	1.00e-79	289.00
IUUC-Oru-084839	Oryza rufipogon	43.01	1.00e-79	289.00
IUUC-Osa-085377	Oryza sativa	43.05	3.00e-80	291.00
IUUC-Oga-088610	Otolemur garnettii	87.10	0.00e+00	687.00
IUUC-Oar-089639	Ovis aries	85.18	0.00e+00	662.00
IUUC-Ptr-091023	Pan troglodytes	87.10	0.00e+00	688.00
IUUC-Pan-091727	Papio anubis	87.90	0.00e+00	693.00
IUUC-Ppa-095738	Physcomitrella patens	42.97	2.00e-86	311.00
IUUC-Pfo-097058	Poecilia formosa	76.52	5.00e-179	619.00
IUUC-Pab-098238	Pongo abelii	86.83	0.00e+00	690.00
IUUC-Pca-100580	Procavia capensis	85.48	0.00e+00	672.00
IUUC-Ppe-101681	Prunus persica	42.78	1.00e-81	296.00
IUUC-Pva-102928	Pteropus vampyrus	83.87	0.00e+00	651.00
IUUC-Rno-104846	Rattus norvegicus	86.29	0.00e+00	684.00
IUUC-Smo-108836	Selaginella moellendorffii	45.16	8.00e-84	303.00
IUUC-Sit-110150	Setaria italica	41.85	6.00e-80	290.00
IUUC-Sly-111048	Solanum lycopersicum	43.96	4.00e-80	290.00
IUUC-Sbi-114685	Sorghum bicolor	42.43	4.00e-78	284.00
IUUC-Tru-118106	Takifugu rubripes	75.93	3.00e-180	623.00
IUUC-Tni-120079	Tetraodon nigroviridis	76.72	0.00e+00	626.00
IUUC-Tca-121645	Theobroma cacao	43.09	1.00e-80	293.00
IUUC-Tae-125810	Triticum aestivum	37.80	4.00e-71	261.00
IUUC-Tur-126640	Triticum urartu	39.78	8.00e-69	253.00
IUUC-Ttr-128698	Tursiops truncatus	86.83	0.00e+00	686.00
IUUC-Vvi-131647	Vitis vinifera	43.49	4.00e-82	297.00
IUUC-Xtr-131893	Xenopus tropicalis	85.64	0.00e+00	680.00
IUUC-Xma-134089	Xiphophorus maculatus	76.78	1.00e-179	621.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence