iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014295

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000880

Gene Name

LOC100826072; BRADI_1g68530

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G68530	BRADI1G68530.1	BRADI1G68530.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-33	115.7	31	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIsl+lMrdPv++p+Gitydr+sIe wl++g+   cPvt++pl++edlvPn+++rr+iq+wc +n+s
   Q: 31   IPAHFRCPISLDLMRDPVTAPTGITYDRESIEAWLDTGRAaVCPVTHAPLRHEDLVPNHAIRRVIQDWCVANRS 104
           8**************************************99*****************************9986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MALLARRAAR RSAASTKAAA PPAAVAVELS IPAHFRCPIS LDLMRDPVTA PTGITYDRES 60
IEAWLDTGRA AVCPVTHAPL RHEDLVPNHA IRRVIQDWCV ANRSRGVERI PTPKIPLTPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACTGC TGGCGCGGAG GGCGGCTAGG AGGTCAGCGG CCAGCACGAA GGCGGCGGCG 60
CCGCCGGCCG CAGTGGCGGT GGAGCTGTCG ATCCCGGCGC ACTTCCGGTG CCCGATCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100826072

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	46.88	6.00e-95	340.00
IUUC-Lpe-050847	Leersia perrieri	76.68	5.00e-156	543.00
IUUC-Mac-064511	Musa acuminata	47.70	4.00e-91	327.00
IUUC-Oba-075321	Oryza barthii	83.81	2.00e-49	188.00
IUUC-Obr-076825	Oryza brachyantha	75.51	7.00e-98	348.00
IUUC-Ogl-076969	Oryza glaberrima	76.56	2.00e-164	571.00
IUUC-Ogu-078872	Oryza glumaepatula	75.00	6.00e-169	586.00
IUUC-Oin-079622	Oryza indica	76.56	2.00e-164	571.00
IUUC-Olo-080664	Oryza longistaminata	73.08	7.00e-110	389.00
IUUC-Ome-081144	Oryza meridionalis	72.94	3.00e-114	404.00
IUUC-Oni-082871	Oryza nivara	76.56	2.00e-164	571.00
IUUC-Opu-084061	Oryza punctata	77.03	5.00e-160	556.00
IUUC-Oru-084561	Oryza rufipogon	76.56	1.00e-164	572.00
IUUC-Osa-086045	Oryza sativa	76.56	2.00e-164	571.00
IUUC-Olu-087884	Ostreococcus lucimarinus	60.29	1.00e-21	93.60
IUUC-Sit-109976	Setaria italica	78.81	2.00e-169	587.00
IUUC-Sbi-114180	Sorghum bicolor	76.24	5.00e-160	556.00
IUUC-Tae-122962	Triticum aestivum	77.20	2.00e-170	591.00
IUUC-Tur-126397	Triticum urartu	79.43	6.00e-86	308.00
IUUC-Vvi-131485	Vitis vinifera	50.84	5.00e-99	353.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence