iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012455

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02041582

Gene Name

AMBRA1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000004282.6	ENSBTAT00000060968.2	ENSBTAP00000053378.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-07	32.1	93	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gH    +c+ f ++  +l++sG+ Dg +++WDl+
   Q: 93   GHRRTPWCVTFhPTisGLIASGCLDGEVRIWDLH 126
           6777779*****76779***************97 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MKVVPEKNAV RILWGRERGT RTFGAQRLLQ ELVEDKTRCM KWEGKRVELP DSPRSTFLLA 60
FSPDRTLLAS THVNHNIYIT EVKTGKCVHS LIGHRRTPWC VTFHPTISGL IASGCLDGEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGTCTCCC GAGCGGCAGC GGCGGCGGCG GCGGCGGCGC CGGGTCGAAG GCTTCTCGTC 60
CGCGAGGCCC CCGCGCTCAG GCTGCTTTCT CCCGCCGGTC GGCGGAGCGG ACCTCTCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005829--C:cytosol
GO:0043231--C:intracellular membrane-bounded organelle
GO:0005739--C:mitochondrion
GO:0045335--C:phagocytic vesicle
GO:0006914--P:autophagy
GO:0008285--P:negative regulation of cell proliferation
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0021915--P:neural tube development
GO:0098779--P:positive regulation of macromitophagy in response to mitochondrial depolarization
GO:0043552--P:positive regulation of phosphatidylinositol 3-kinase activity
GO:2000785--P:regulation of autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001917	Ailuropoda melanoleuca	95.31	0.00e+00	1767.00
IUUC-Atr-002557	Amborella trichopoda	37.74	1.00e-29	125.00
IUUC-Apl-004186	Anas platyrhynchos	80.98	0.00e+00	1920.00
IUUC-Aca-004419	Anolis carolinensis	76.82	0.00e+00	1808.00
IUUC-Aly-006308	Arabidopsis lyrata	42.33	2.00e-27	117.00
IUUC-Ath-007656	Arabidopsis thaliana	36.92	5.00e-28	119.00
IUUC-Ame-011354	Astyanax mexicanus	58.31	0.00e+00	1296.00
IUUC-Bdi-014580	Brachypodium distachyon	42.33	8.00e-30	125.00
IUUC-Bol-016094	Brassica oleracea	44.81	3.00e-28	120.00
IUUC-Bra-017308	Brassica rapa	45.45	2.00e-29	124.00
IUUC-Cja-019073	Callithrix jacchus	92.04	2.00e-158	553.00
IUUC-Cfa-020994	Canis familiaris	91.36	0.00e+00	1488.00
IUUC-Cpo-022101	Cavia porcellus	92.06	0.00e+00	2139.00
IUUC-Csa-023273	Chlorocebus sabaeus	93.01	0.00e+00	1564.00
IUUC-Cin-025567	Ciona intestinalis	51.71	9.00e-56	211.00
IUUC-Csv-026005	Ciona savignyi	51.24	9.00e-56	209.00
IUUC-Dre-028282	Danio rerio	58.02	0.00e+00	1284.00
IUUC-Dno-029948	Dasypus novemcinctus	92.98	0.00e+00	2180.00
IUUC-Dor-030568	Dipodomys ordii	93.56	0.00e+00	1214.00
IUUC-Ete-032864	Echinops telfairi	91.67	0.00e+00	1147.00
IUUC-Eca-034392	Equus caballus	93.95	0.00e+00	1596.00
IUUC-Eeu-034440	Erinaceus europaeus	85.60	0.00e+00	1213.00
IUUC-Fca-035359	Felis catus	92.27	0.00e+00	2132.00
IUUC-Fal-037483	Ficedula albicollis	81.40	0.00e+00	1958.00
IUUC-Gmo-039343	Gadus morhua	75.18	0.00e+00	776.00
IUUC-Gga-040787	Gallus gallus	81.47	0.00e+00	1231.00
IUUC-Gac-041321	Gasterosteus aculeatus	62.07	0.00e+00	1357.00
IUUC-Gma-044022	Glycine max	36.14	2.00e-28	121.00
IUUC-Ggo-044775	Gorilla gorilla	93.81	0.00e+00	1042.00
IUUC-Hsa-045708	Homo sapiens	94.54	0.00e+00	2221.00
IUUC-Hvu-047536	Hordeum vulgare	41.57	3.00e-29	124.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	94.94	0.00e+00	1220.00
IUUC-Lch-050255	Latimeria chalumnae	69.39	0.00e+00	1407.00
IUUC-Lpe-050684	Leersia perrieri	41.76	3.00e-30	127.00
IUUC-Loc-052881	Lepisosteus oculatus	67.39	0.00e+00	1501.00
IUUC-Laf-053342	Loxodonta africana	70.93	0.00e+00	953.00
IUUC-Mcc-055848	Macaca mulatta	92.38	0.00e+00	2186.00
IUUC-Meu-056320	Macropus eugenii	83.38	0.00e+00	1066.00
IUUC-Mtr-058685	Medicago truncatula	39.68	5.00e-29	123.00
IUUC-Mga-059401	Meleagris gallopavo	84.57	0.00e+00	1662.00
IUUC-Mmr-061037	Microcebus murinus	93.40	0.00e+00	2162.00
IUUC-Mdo-062484	Monodelphis domestica	74.70	0.00e+00	1689.00
IUUC-Mmu-064090	Mus musculus	92.93	0.00e+00	2160.00
IUUC-Mac-065675	Musa acuminata	36.09	9.00e-30	125.00
IUUC-Mpu-066165	Mustela putorius furo	92.91	0.00e+00	1501.00
IUUC-Mlu-068038	Myotis lucifugus	93.16	0.00e+00	2225.00
IUUC-Nle-069361	Nomascus leucogenys	95.66	0.00e+00	1919.00
IUUC-Opr-070360	Ochotona princeps	90.19	0.00e+00	855.00
IUUC-Ont-071277	Oreochromis niloticus	62.96	0.00e+00	1369.00
IUUC-Oan-073623	Ornithorhynchus anatinus	82.19	0.00e+00	1033.00
IUUC-Ocu-074600	Oryctolagus cuniculus	95.02	0.00e+00	1384.00
IUUC-Oba-075024	Oryza barthii	37.21	6.00e-32	132.00
IUUC-Obr-076172	Oryza brachyantha	37.67	3.00e-32	133.00
IUUC-Ogl-077411	Oryza glaberrima	37.21	8.00e-32	132.00
IUUC-Ogu-078025	Oryza glumaepatula	37.21	9.00e-32	132.00
IUUC-Oni-082463	Oryza nivara	37.21	5.00e-32	133.00
IUUC-Opu-084041	Oryza punctata	38.19	2.00e-31	131.00
IUUC-Oru-085075	Oryza rufipogon	37.21	3.00e-31	130.00
IUUC-Osa-085781	Oryza sativa	37.21	9.00e-32	132.00
IUUC-Ola-086729	Oryzias latipes	63.07	0.00e+00	1388.00
IUUC-Olu-087735	Ostreococcus lucimarinus	40.32	1.00e-23	104.00
IUUC-Oga-089113	Otolemur garnettii	92.85	0.00e+00	2092.00
IUUC-Oar-090171	Ovis aries	97.82	0.00e+00	2149.00
IUUC-Ptr-090970	Pan troglodytes	94.62	0.00e+00	2222.00
IUUC-Pan-092778	Papio anubis	93.33	0.00e+00	1577.00
IUUC-Psi-093571	Pelodiscus sinensis	80.67	0.00e+00	1947.00
IUUC-Pma-094563	Petromyzon marinus	73.33	5.00e-105	373.00
IUUC-Ppa-095832	Physcomitrella patens	35.96	2.00e-29	124.00
IUUC-Pfo-097365	Poecilia formosa	61.17	0.00e+00	1274.00
IUUC-Pab-098647	Pongo abelii	94.44	0.00e+00	1220.00
IUUC-Pop-099742	Populus trichocarpa	42.33	4.00e-29	123.00
IUUC-Pca-101035	Procavia capensis	90.28	0.00e+00	1162.00
IUUC-Ppe-101783	Prunus persica	42.22	4.00e-29	123.00
IUUC-Pva-103187	Pteropus vampyrus	96.44	0.00e+00	909.00
IUUC-Rno-105701	Rattus norvegicus	92.77	0.00e+00	2141.00
IUUC-Sha-107612	Sarcophilus harrisii	85.06	0.00e+00	1986.00
IUUC-Smo-108871	Selaginella moellendorffii	38.25	9.00e-27	115.00
IUUC-Sit-110786	Setaria italica	38.12	3.00e-32	133.00
IUUC-Sly-110859	Solanum lycopersicum	37.14	1.00e-30	128.00
IUUC-Stu-112031	Solanum tuberosum	37.62	1.00e-30	128.00
IUUC-Sar-113242	Sorex araneus	94.20	0.00e+00	1064.00
IUUC-Ssc-116094	Sus scrofa	95.38	0.00e+00	2224.00
IUUC-Tru-118308	Takifugu rubripes	60.78	0.00e+00	1316.00
IUUC-Tsy-119552	Tarsius syrichta	91.53	0.00e+00	1201.00
IUUC-Tca-121616	Theobroma cacao	38.57	1.00e-30	128.00
IUUC-Tae-124768	Triticum aestivum	42.17	8.00e-30	125.00
IUUC-Tur-126480	Triticum urartu	42.17	4.00e-30	126.00
IUUC-Tbe-127902	Tupaia belangeri	92.57	0.00e+00	943.00
IUUC-Ttr-129278	Tursiops truncatus	92.64	0.00e+00	1179.00
IUUC-Vpa-130741	Vicugna pacos	86.32	0.00e+00	832.00
IUUC-Vvi-131437	Vitis vinifera	45.45	9.00e-29	122.00
IUUC-Xtr-132247	Xenopus tropicalis	65.36	0.00e+00	1324.00
IUUC-Xma-134277	Xiphophorus maculatus	62.02	0.00e+00	1391.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence