iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016300

Ensembl Protein ID

Bo6g080890.1

UniProt Accession

A0A0D3CVS3; A0A0D3CVS3_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo6g080890	Bo6g080890.1	Bo6g080890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.90e-25	89.7	145	186
ULD/UDP/UBQ/UBQ_PIM	1.30e-21	77.8	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e++++ql++MG   +d+e++ +aLraa+nn+e+Av+yL++g
   Q: 145  LEPLVQQLMDMGggsWDKETVTRALRAAHNNPERAVDYLYSG 186
           69*************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkltvktl g++fe++v+++dt+ ++K++i++++g   +p+ qq LI++Gk+LkD+ttL e+++ ++ +++++++ks+
   Q: 1    MKLTVKTLMGRQFEIRVQSSDTIMAVKKNIEDSQGkdnYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVMLSKSR 78
           99************************************************************************9985 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MKLTVKTLMG RQFEIRVQSS DTIMAVKKNI EDSQGKDNYP CGQQLLIHNG KVLKDETTLV 60
ENKVTEEGFL VVMLSKSRTA GSSSGQSCTQ PASTTTTTSS TTPAAPSTTQ STAVPASPVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTCA CCGTTAAGAC TCTCATGGGT CGTCAATTTG AAATTAGGGT TCAGTCCTCC 60
GATACGGTTA GTTCTCGTCC CTTTTCCATG AGTAAAATAT CGCGTAGGAG AGTAGAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006159	Arabidopsis lyrata	79.89	3.00e-162	563.00
IUUC-Ath-006674	Arabidopsis thaliana	70.13	2.00e-144	505.00
IUUC-Afl-008605	Aspergillus flavus	36.86	2.00e-31	130.00
IUUC-Afu-008877	Aspergillus fumigatus	37.75	2.00e-30	126.00
IUUC-Aor-010032	Aspergillus oryzae	36.86	2.00e-31	129.00
IUUC-Bdi-014355	Brachypodium distachyon	60.54	1.00e-108	385.00
IUUC-Bra-016952	Brassica rapa	93.37	2.00e-166	578.00
IUUC-Csv-025823	Ciona savignyi	31.56	2.00e-27	115.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	46.94	1.00e-17	83.60
IUUC-Cne-027056	Cryptococcus neoformans	40.87	5.00e-14	72.00
IUUC-Dre-028209	Danio rerio	32.75	4.00e-40	158.00
IUUC-Fox-037960	Fusarium oxysporum	49.61	2.00e-22	99.80
IUUC-Fso-038107	Fusarium solani	50.41	2.00e-21	96.30
IUUC-Ggr-040116	Gaeumannomyces graminis	50.00	2.00e-22	99.80
IUUC-Lch-049719	Latimeria chalumnae	34.22	4.00e-48	184.00
IUUC-Mor-057287	Magnaporthe oryzae	50.83	1.00e-19	90.50
IUUC-Mpo-057609	Magnaporthe poae	50.00	2.00e-21	95.90
IUUC-Mga-060060	Meleagris gallopavo	33.07	2.00e-03	36.60
IUUC-Mvi-060220	Microbotryum violaceum	48.41	1.00e-24	107.00
IUUC-Mac-065029	Musa acuminata	59.34	8.00e-112	396.00
IUUC-Nfi-068390	Neosartorya fischeri	38.15	2.00e-30	125.00
IUUC-Opr-070234	Ochotona princeps	44.64	2.00e-09	56.20
IUUC-Ogu-078023	Oryza glumaepatula	61.68	7.00e-100	357.00
IUUC-Olu-087843	Ostreococcus lucimarinus	40.27	3.00e-49	188.00
IUUC-Pno-095064	Phaeosphaeria nodorum	31.47	1.00e-23	103.00
IUUC-Ppe-101522	Prunus persica	68.17	1.00e-133	469.00
IUUC-Pva-102412	Pteropus vampyrus	33.68	3.00e-44	172.00
IUUC-Ptt-103717	Puccinia triticina	46.32	1.00e-26	113.00
IUUC-Pte-104303	Pyrenophora teres	51.16	9.00e-23	100.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	51.16	1.00e-22	100.00
IUUC-Sit-109813	Setaria italica	58.60	2.00e-104	372.00
IUUC-Sly-111349	Solanum lycopersicum	67.92	1.00e-125	442.00
IUUC-Tni-120493	Tetraodon nigroviridis	36.34	3.00e-46	178.00
IUUC-Tca-121594	Theobroma cacao	69.07	2.00e-128	451.00
IUUC-Tre-121911	Trichoderma reesei	37.08	4.00e-31	128.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence