iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017791

Ensembl Protein ID

Bra022181.1-P

UniProt Accession

M4E084; M4E084_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022181	Bra022181.1	Bra022181.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-22	80.0	455	486
UBD/Beta-Prp	1.70e-46	159.8	409	690

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtl..lvsGsdDgtikvWD 29
           H ++v++laf  +++   +v+++dD+ ikvWD
   Q: 455  HVGRVNDLAFahPNKQicIVTCGDDKLIKVWD 486
           99*********97744478************* PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl..sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           ++++  +t v++spd++++ ++++ + i v+ ++  +l + l  + h + v+++ f +  k   +vt+++D++ikvwd+ +gk ++t++ghe+sv+
   Q: 409  KEPSISVTRVAWSPDGNFIGVSFTKHLIHVYAYQGSDLRQHLeiEAHVGRVNDLAFAHPNKqiCIVTCGDDKLIKVWDI-NGKKLYTFEGHEASVY 503
           555566888*****************************7777669***********99888899**************9.58889*********** PP
   S: 99   slsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsf 188
           s+  ++  + +++ s+  d  i+ w  ++     + +++  ++ +++ ++ dg+ l+s+++    D+++  W+ + g l rt  g  ++s   ++f
   Q: 504  SICPHQkeNIQFIFSTALDGKIKAWLYDNVGSRVDYDAPG-QWCTTMLYSADGSRLFSCGTskegDSFLVEWNESEGALKRTYVGFRKKSNGVVQF 598
           *****98666***************888876666566665.599999999999999999864555888888999*********9999999999*** PP
   S: 189  dsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlv 281
           d ++++++++++d++vk+wd+ +++ + t ++    ++  ++rf +++++l++ ++D+  +i  l + d l+tl   + s  s+ + +++ + +v
   Q: 599  DTTRNRFLAVGEDNQVKFWDMDNTNLLTTIEAEGGLPSlpRLRFNKEGNLLAVSTADNGFKI--LANADGLRTLRAYEASKASIEM-KVSTSAMV 690
           ******************************999976652268888999**99999****999..4555555555555544455554.44444444 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFYFNIKY FEEKALAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD LKVFATFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCTC TGAGCAGAGA GTTAGTTTTC TTAATCCTCC AGTTCTTAGA TGAAGAGAAG 60
TTCAAGGAAT CTGTTCACAA GTAAGTCTTC TTGTTCTTTG TCTGTTAAGG TTTTGTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015826	Brassica oleracea	97.27	0.00e+00	2191.00
IUUC-Mtr-057839	Medicago truncatula	73.99	0.00e+00	1678.00
IUUC-Mac-064999	Musa acuminata	66.70	0.00e+00	1550.00
IUUC-Sly-111169	Solanum lycopersicum	71.94	0.00e+00	1619.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence