iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044207

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000844

Gene Name

LOC100816457; GLYMA_11G046500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA11G04980	GLYMA11G04980.2	GLYMA11G04980.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-28	100.1	129	200

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           evp+ f+CpIsle+M+dPv+l++G+ty+rs+I kw++ g+ tcP+t+q+l +++++Pn+tl rli+ w +++
   Q: 129  EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSVTPNTTLYRLIHMWFSQK 200
           69******************************************************************9986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MLIIISFLPQ IKQISTVNPS LFPSILTSSL SRCTDLRGVC VLGFLPFLSL SALHFCVFFS 60
IGVSKMPMFQ PCRKDLVAGY EGGGDGQILD LDTAVKDGVL GGVEGGVLGG GVGEKVDLGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTAATGTA AAACATGGAA TTATTTAATC ATTTTTGCAC AGTTTGGGAA GTGCCCGAAA 60
AGAAGAGGCT CGGAGCGTTT GGCAGCAGAG AGAGAGAGAG AGAGAGAGAG GGATGGGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100816457

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002608	Amborella trichopoda	72.25	3.00e-156	544.00
IUUC-Mac-065362	Musa acuminata	64.13	1.00e-151	529.00
IUUC-Sly-111041	Solanum lycopersicum	61.78	2.00e-145	508.00
IUUC-Stu-112727	Solanum tuberosum	68.00	4.00e-176	610.00
IUUC-Tca-121202	Theobroma cacao	80.49	0.00e+00	730.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence