iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099984

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

F-box family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_754238; POPTR_0002s04570g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s04570	POPTR_0002s04570.1	POPTR_0002s04570.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	59.30	2.00e-159	560.00	IUUC-Ath-007393

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MHFENQPHIP PATPGGSTAS FTSLDIPHRV KKNRGNYNCG RCGLPKKGHV CHLPPTSTTT 60
TTPTQTPTDS SVSVSTSTSR PPPRQQYSNL RRALSFDDSD LRCDSPEVEI DESEMDLFGS 120

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Nucleotide Sequence
(Fasta)

ATGCACTTCG AAAACCAACC TCATATCCCC CCCGCCACTC CTGGCGGATC CACCGCCTCC 60
TTCACCTCCT TGGATATCCC CCACCGTGTC AAAAAGAACA GAGGAAATTA CAACTGTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF12937--F-box-like

SMART

SM00367--LRR_CC

KEGG

pop:POPTR_0002s04570g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000445	Aegilops tauschii	59.38	2.00e-109	389.00
IUUC-Atr-002985	Amborella trichopoda	65.32	1.00e-146	512.00
IUUC-Aly-005592	Arabidopsis lyrata	61.18	1.00e-170	592.00
IUUC-Ath-007393	Arabidopsis thaliana	59.63	1.00e-171	595.00
IUUC-Bdi-014107	Brachypodium distachyon	52.86	7.00e-129	453.00
IUUC-Bol-015754	Brassica oleracea	60.13	2.00e-170	591.00
IUUC-Bra-017822	Brassica rapa	60.40	0.00e+00	626.00
IUUC-Gma-042847	Glycine max	65.96	0.00e+00	637.00
IUUC-Hvu-047594	Hordeum vulgare	59.53	3.00e-120	424.00
IUUC-Lpe-051054	Leersia perrieri	60.10	4.00e-121	427.00
IUUC-Mtr-057878	Medicago truncatula	64.59	0.00e+00	629.00
IUUC-Mac-065661	Musa acuminata	62.05	5.00e-180	623.00
IUUC-Oba-075222	Oryza barthii	55.65	5.00e-119	420.00
IUUC-Obr-076319	Oryza brachyantha	60.27	2.00e-130	458.00
IUUC-Ogl-077268	Oryza glaberrima	60.82	9.00e-122	429.00
IUUC-Ogu-078988	Oryza glumaepatula	60.45	2.00e-131	462.00
IUUC-Oin-079671	Oryza indica	60.34	3.00e-131	461.00
IUUC-Olo-080720	Oryza longistaminata	60.36	6.00e-110	390.00
IUUC-Oni-082672	Oryza nivara	60.04	5.00e-131	461.00
IUUC-Opu-083555	Oryza punctata	61.83	5.00e-132	464.00
IUUC-Oru-085222	Oryza rufipogon	59.91	4.00e-131	461.00
IUUC-Osa-085326	Oryza sativa	60.91	3.00e-131	461.00
IUUC-Ppe-102083	Prunus persica	65.67	0.00e+00	675.00
IUUC-Sit-110802	Setaria italica	60.14	1.00e-123	436.00
IUUC-Sly-111264	Solanum lycopersicum	63.65	0.00e+00	628.00
IUUC-Stu-112225	Solanum tuberosum	72.84	0.00e+00	628.00
IUUC-Sbi-114580	Sorghum bicolor	54.82	9.00e-136	476.00
IUUC-Tca-121854	Theobroma cacao	74.00	0.00e+00	728.00
IUUC-Tae-123806	Triticum aestivum	59.11	2.00e-117	415.00
IUUC-Tur-126204	Triticum urartu	55.69	6.00e-99	353.00
IUUC-Vvi-130932	Vitis vinifera	70.56	0.00e+00	632.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence