iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058659

Ensembl Protein ID

KEH19099

UniProt Accession

A0A072TNL2; A0A072TNL2_MEDTR

Genbank Protein ID

KEH19099.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g037340

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g037340	KEH19099	KEH19099
MTR_8g037340	KEH19098	KEH19098

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-20	71.6	223	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ ++t+++f s+  +++s+s D+t++vW++ +g++ +
   Q: 223  GHSKDITDFDFtSNnQYIASASLDKTVRVWEIEKGNCMR 261
           8***********555*****************9999975 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAEHSTATVN HQQNNNNNIN DDDDKKKDKT SDPDLFCCLL QPLTSDADPE YTGIRRLLLH 60
QKAEAGILRR KDWRCNGKTY VAYRNYINRP RNWESLGRAP SLRSTPGNSG RWFPSPSPLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTGCACC GATCATCACC GGTTGGTAAT TTCTGAATAC AGCTTCAACT TCTCTCTCAT 60
TTCGAACCTT AACCAAGTTC ACCGGAGATT CAGGTCCAAC CACCACTCTC CGATGAACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	52.42	5.00e-91	327.00
IUUC-Aml-001761	Ailuropoda melanoleuca	33.06	1.00e-45	177.00
IUUC-Atr-002577	Amborella trichopoda	64.42	0.00e+00	638.00
IUUC-Aca-004423	Anolis carolinensis	33.89	1.00e-44	173.00
IUUC-Aly-005453	Arabidopsis lyrata	70.24	0.00e+00	687.00
IUUC-Ath-007256	Arabidopsis thaliana	69.84	0.00e+00	683.00
IUUC-Ame-010600	Astyanax mexicanus	32.59	2.00e-41	163.00
IUUC-Bta-013511	Bos taurus	33.06	9.00e-46	177.00
IUUC-Bdi-014322	Brachypodium distachyon	58.10	2.00e-152	531.00
IUUC-Bol-015992	Brassica oleracea	69.64	0.00e+00	685.00
IUUC-Bra-017399	Brassica rapa	70.16	0.00e+00	674.00
IUUC-Cja-019508	Callithrix jacchus	33.33	7.00e-46	177.00
IUUC-Cfa-020273	Canis familiaris	33.06	1.00e-46	180.00
IUUC-Cpo-022002	Cavia porcellus	33.33	8.00e-46	177.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	23.66	2.00e-11	63.20
IUUC-Csa-023862	Chlorocebus sabaeus	33.06	7.00e-46	177.00
IUUC-Cin-025687	Ciona intestinalis	34.73	1.00e-57	216.00
IUUC-Csv-025992	Ciona savignyi	35.65	2.00e-55	209.00
IUUC-Dre-028697	Danio rerio	32.59	3.00e-42	165.00
IUUC-Dno-029208	Dasypus novemcinctus	32.78	2.00e-45	176.00
IUUC-Dor-030316	Dipodomys ordii	36.67	6.00e-28	117.00
IUUC-Eca-033362	Equus caballus	29.00	3.00e-26	112.00
IUUC-Eeu-034599	Erinaceus europaeus	29.12	2.00e-28	119.00
IUUC-Fca-035874	Felis catus	33.06	1.00e-45	176.00
IUUC-Gmo-039176	Gadus morhua	33.33	4.00e-43	168.00
IUUC-Gga-040458	Gallus gallus	34.48	8.00e-16	75.50
IUUC-Gac-041802	Gasterosteus aculeatus	32.50	4.00e-43	168.00
IUUC-Gma-043787	Glycine max	82.40	0.00e+00	816.00
IUUC-Ggo-045546	Gorilla gorilla	33.33	3.00e-46	178.00
IUUC-Hsa-046407	Homo sapiens	33.33	3.00e-46	178.00
IUUC-Hvu-047726	Hordeum vulgare	57.81	2.00e-144	505.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	33.06	9.00e-46	177.00
IUUC-Lpe-051374	Leersia perrieri	59.06	4.00e-149	520.00
IUUC-Loc-052403	Lepisosteus oculatus	30.92	6.00e-41	161.00
IUUC-Laf-053721	Loxodonta africana	33.06	1.00e-45	177.00
IUUC-Mcc-055449	Macaca mulatta	33.06	7.00e-46	177.00
IUUC-Meu-056487	Macropus eugenii	32.78	1.00e-43	170.00
IUUC-Mmr-061406	Microcebus murinus	33.06	2.00e-45	175.00
IUUC-Mdo-062331	Monodelphis domestica	31.90	3.00e-38	152.00
IUUC-Mmu-064001	Mus musculus	33.06	2.00e-45	176.00
IUUC-Mac-064934	Musa acuminata	66.53	0.00e+00	657.00
IUUC-Mpu-065871	Mustela putorius furo	33.06	1.00e-45	177.00
IUUC-Mlu-067463	Myotis lucifugus	32.78	4.00e-44	171.00
IUUC-Nle-070136	Nomascus leucogenys	33.06	5.00e-46	178.00
IUUC-Opr-070913	Ochotona princeps	33.52	1.00e-43	170.00
IUUC-Ont-071347	Oreochromis niloticus	33.33	3.00e-44	172.00
IUUC-Oan-073527	Ornithorhynchus anatinus	30.43	1.00e-38	152.00
IUUC-Ocu-074829	Oryctolagus cuniculus	31.79	1.00e-40	160.00
IUUC-Oba-075666	Oryza barthii	58.94	9.00e-153	532.00
IUUC-Obr-076413	Oryza brachyantha	58.33	3.00e-147	514.00
IUUC-Ogl-076998	Oryza glaberrima	60.26	5.00e-151	526.00
IUUC-Ogu-078287	Oryza glumaepatula	59.15	2.00e-153	535.00
IUUC-Oin-079359	Oryza indica	58.74	1.00e-152	532.00
IUUC-Olo-080438	Oryza longistaminata	59.29	4.00e-88	317.00
IUUC-Ome-081328	Oryza meridionalis	59.88	1.00e-156	545.00
IUUC-Oni-082574	Oryza nivara	58.94	9.00e-153	532.00
IUUC-Opu-083376	Oryza punctata	54.55	1.00e-132	466.00
IUUC-Oru-085162	Oryza rufipogon	57.81	1.00e-146	512.00
IUUC-Osa-085507	Oryza sativa	57.81	1.00e-146	512.00
IUUC-Ola-087387	Oryzias latipes	32.78	4.00e-41	161.00
IUUC-Oga-088694	Otolemur garnettii	33.06	1.00e-45	176.00
IUUC-Oar-090355	Ovis aries	33.06	7.00e-46	177.00
IUUC-Ptr-091488	Pan troglodytes	29.80	6.00e-22	97.80
IUUC-Pan-092516	Papio anubis	33.06	7.00e-46	177.00
IUUC-Pma-094572	Petromyzon marinus	32.60	3.00e-50	191.00
IUUC-Ppa-096003	Physcomitrella patens	48.69	6.00e-120	423.00
IUUC-Pfo-096819	Poecilia formosa	34.24	5.00e-42	164.00
IUUC-Pab-098373	Pongo abelii	32.96	3.00e-45	175.00
IUUC-Pop-099930	Populus trichocarpa	73.83	0.00e+00	732.00
IUUC-Pca-100248	Procavia capensis	33.06	2.00e-43	169.00
IUUC-Ppe-101592	Prunus persica	72.71	0.00e+00	711.00
IUUC-Pva-102971	Pteropus vampyrus	33.06	2.00e-45	176.00
IUUC-Rno-105386	Rattus norvegicus	32.87	3.00e-44	172.00
IUUC-Sha-107418	Sarcophilus harrisii	32.78	9.00e-44	170.00
IUUC-Smo-108859	Selaginella moellendorffii	47.65	1.00e-123	435.00
IUUC-Sit-109987	Setaria italica	59.19	1.00e-157	548.00
IUUC-Sly-111433	Solanum lycopersicum	74.79	2.00e-149	521.00
IUUC-Stu-112677	Solanum tuberosum	70.85	0.00e+00	694.00
IUUC-Sar-113317	Sorex araneus	50.68	2.00e-18	86.70
IUUC-Sbi-114115	Sorghum bicolor	54.52	2.00e-90	325.00
IUUC-Ssc-115697	Sus scrofa	35.71	2.00e-15	75.50
IUUC-Tru-118749	Takifugu rubripes	33.43	3.00e-43	169.00
IUUC-Tni-119685	Tetraodon nigroviridis	33.15	1.00e-42	166.00
IUUC-Tca-121769	Theobroma cacao	73.68	0.00e+00	706.00
IUUC-Tae-125563	Triticum aestivum	55.23	3.00e-85	307.00
IUUC-Tur-126403	Triticum urartu	53.23	5.00e-93	333.00
IUUC-Tbe-127245	Tupaia belangeri	32.36	1.00e-29	124.00
IUUC-Ttr-128854	Tursiops truncatus	33.33	1.00e-47	183.00
IUUC-Vvi-131113	Vitis vinifera	72.30	0.00e+00	694.00
IUUC-Xtr-132420	Xenopus tropicalis	31.51	6.00e-42	164.00
IUUC-Xma-134302	Xiphophorus maculatus	33.61	4.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence