iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132420

Ensembl Protein ID

ENSXETP00000031911.3

UniProt Accession

F6TEZ9; F6TEZ9_XENTR

Genbank Protein ID

ENSXETP00000031911

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01175357

Gene Name

wdr13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000014589.3	ENSXETT00000031911.3	ENSXETP00000031911.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-19	69.0	201	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt  v+++a+  s++++vs s Dg++++W++ +g++++
   Q: 201  GHTQAVSDFAWslSNDIIVSTSLDGSVRIWNTQDGRCIR 239
           8***********987**********************87 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

RYNAYRTPAH PQFRTQYIRR RSQLLRENAK AGYEPTVRRQ YLKLRSQLLA QRYGPLSEQS 60
SFRAHSNSIR SSRTTLDRLE DLEEDPRSQG SRGHRRSVSR GSYQLQAQMN RVAQDDRAPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTACAACG CTTATCGCAC ACCTGCACAC CCGCAGTTCC GCACGCAGTA CATCAGGCGG 60
CGCAGCCAGC TCCTCCGTGA GAATGCCAAG GCCGGCTATG AGCCGACGGT GCGACGGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	34.45	2.00e-26	113.00
IUUC-Aml-001761	Ailuropoda melanoleuca	81.17	0.00e+00	716.00
IUUC-Atr-002577	Amborella trichopoda	36.53	4.00e-55	209.00
IUUC-Aca-004423	Anolis carolinensis	85.56	0.00e+00	794.00
IUUC-Aly-005453	Arabidopsis lyrata	36.23	2.00e-50	192.00
IUUC-Ath-007256	Arabidopsis thaliana	35.93	1.00e-49	190.00
IUUC-Ame-010600	Astyanax mexicanus	80.50	0.00e+00	665.00
IUUC-Bta-013511	Bos taurus	81.17	0.00e+00	716.00
IUUC-Bdi-014322	Brachypodium distachyon	37.20	1.00e-51	197.00
IUUC-Bol-015992	Brassica oleracea	38.02	1.00e-52	200.00
IUUC-Bra-017399	Brassica rapa	37.13	1.00e-52	200.00
IUUC-Cja-019508	Callithrix jacchus	81.38	0.00e+00	717.00
IUUC-Cfa-020273	Canis familiaris	80.96	0.00e+00	714.00
IUUC-Cpo-022002	Cavia porcellus	80.54	0.00e+00	715.00
IUUC-Csa-023862	Chlorocebus sabaeus	81.17	0.00e+00	716.00
IUUC-Cin-025687	Ciona intestinalis	56.04	8.00e-150	523.00
IUUC-Csv-025992	Ciona savignyi	55.58	9.00e-148	516.00
IUUC-Dre-028697	Danio rerio	80.92	0.00e+00	674.00
IUUC-Dno-029208	Dasypus novemcinctus	81.17	0.00e+00	715.00
IUUC-Dor-030316	Dipodomys ordii	81.78	6.00e-89	321.00
IUUC-Eca-033362	Equus caballus	79.86	1.00e-173	602.00
IUUC-Eeu-034599	Erinaceus europaeus	69.62	2.00e-108	385.00
IUUC-Fca-035874	Felis catus	81.17	0.00e+00	714.00
IUUC-Gmo-039176	Gadus morhua	80.33	0.00e+00	664.00
IUUC-Gga-040458	Gallus gallus	76.34	3.00e-61	226.00
IUUC-Gac-041802	Gasterosteus aculeatus	79.87	0.00e+00	689.00
IUUC-Gma-043787	Glycine max	37.01	9.00e-52	197.00
IUUC-Ggo-045546	Gorilla gorilla	81.38	0.00e+00	718.00
IUUC-Hsa-046407	Homo sapiens	81.38	0.00e+00	718.00
IUUC-Hvu-047726	Hordeum vulgare	34.90	2.00e-47	182.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	81.17	0.00e+00	716.00
IUUC-Lpe-051374	Leersia perrieri	37.50	1.00e-53	203.00
IUUC-Loc-052403	Lepisosteus oculatus	72.48	0.00e+00	647.00
IUUC-Laf-053721	Loxodonta africana	81.17	0.00e+00	716.00
IUUC-Mcc-055449	Macaca mulatta	81.17	0.00e+00	716.00
IUUC-Meu-056487	Macropus eugenii	84.31	0.00e+00	777.00
IUUC-Mtr-058659	Medicago truncatula	32.88	9.00e-47	181.00
IUUC-Mmr-061406	Microcebus murinus	80.95	5.00e-180	623.00
IUUC-Mdo-062331	Monodelphis domestica	84.30	0.00e+00	742.00
IUUC-Mmu-064001	Mus musculus	80.96	0.00e+00	714.00
IUUC-Mac-064934	Musa acuminata	36.83	2.00e-54	206.00
IUUC-Mpu-065871	Mustela putorius furo	80.96	0.00e+00	716.00
IUUC-Mlu-067463	Myotis lucifugus	80.13	0.00e+00	697.00
IUUC-Nle-070136	Nomascus leucogenys	81.17	0.00e+00	716.00
IUUC-Opr-070913	Ochotona princeps	74.27	0.00e+00	628.00
IUUC-Ont-071347	Oreochromis niloticus	80.71	0.00e+00	728.00
IUUC-Oan-073527	Ornithorhynchus anatinus	78.14	2.00e-168	585.00
IUUC-Ocu-074829	Oryctolagus cuniculus	77.34	0.00e+00	670.00
IUUC-Oba-075666	Oryza barthii	37.50	8.00e-53	201.00
IUUC-Obr-076413	Oryza brachyantha	37.28	7.00e-53	201.00
IUUC-Ogl-076998	Oryza glaberrima	37.50	9.00e-53	200.00
IUUC-Ogu-078287	Oryza glumaepatula	37.80	2.00e-53	202.00
IUUC-Oin-079359	Oryza indica	37.50	1.00e-52	200.00
IUUC-Olo-080438	Oryza longistaminata	40.57	3.00e-27	115.00
IUUC-Ome-081328	Oryza meridionalis	37.80	6.00e-57	214.00
IUUC-Oni-082574	Oryza nivara	37.50	8.00e-53	201.00
IUUC-Opu-083376	Oryza punctata	35.01	2.00e-47	183.00
IUUC-Oru-085162	Oryza rufipogon	37.50	1.00e-52	200.00
IUUC-Osa-085507	Oryza sativa	37.50	1.00e-52	200.00
IUUC-Ola-087387	Oryzias latipes	78.83	0.00e+00	686.00
IUUC-Oga-088694	Otolemur garnettii	81.17	0.00e+00	716.00
IUUC-Oar-090355	Ovis aries	79.92	0.00e+00	697.00
IUUC-Ptr-091488	Pan troglodytes	78.55	2.00e-153	535.00
IUUC-Pan-092516	Papio anubis	81.17	0.00e+00	716.00
IUUC-Pma-094572	Petromyzon marinus	76.46	0.00e+00	722.00
IUUC-Ppa-096003	Physcomitrella patens	38.02	2.00e-45	176.00
IUUC-Pfo-096819	Poecilia formosa	77.23	0.00e+00	680.00
IUUC-Pab-098373	Pongo abelii	78.24	0.00e+00	702.00
IUUC-Pop-099930	Populus trichocarpa	37.87	3.00e-54	206.00
IUUC-Pca-100248	Procavia capensis	78.66	0.00e+00	696.00
IUUC-Ppe-101592	Prunus persica	37.31	3.00e-51	195.00
IUUC-Pva-102971	Pteropus vampyrus	80.96	0.00e+00	715.00
IUUC-Rno-105386	Rattus norvegicus	80.20	2.00e-178	618.00
IUUC-Sha-107418	Sarcophilus harrisii	83.89	0.00e+00	768.00
IUUC-Smo-108859	Selaginella moellendorffii	41.30	1.00e-61	229.00
IUUC-Sit-109987	Setaria italica	38.10	8.00e-53	201.00
IUUC-Sly-111433	Solanum lycopersicum	35.76	8.00e-53	200.00
IUUC-Stu-112677	Solanum tuberosum	34.97	6.00e-56	211.00
IUUC-Sar-113317	Sorex araneus	78.79	3.00e-115	408.00
IUUC-Sbi-114115	Sorghum bicolor	39.88	4.00e-25	108.00
IUUC-Ssc-115697	Sus scrofa	79.34	8.00e-105	372.00
IUUC-Tru-118749	Takifugu rubripes	79.96	0.00e+00	686.00
IUUC-Tni-119685	Tetraodon nigroviridis	76.35	0.00e+00	635.00
IUUC-Tca-121769	Theobroma cacao	37.50	1.00e-53	204.00
IUUC-Tae-125563	Triticum aestivum	32.63	4.00e-31	128.00
IUUC-Tur-126403	Triticum urartu	38.62	2.00e-26	112.00
IUUC-Tbe-127245	Tupaia belangeri	82.33	1.00e-104	373.00
IUUC-Ttr-128854	Tursiops truncatus	81.17	0.00e+00	739.00
IUUC-Vvi-131113	Vitis vinifera	36.72	4.00e-52	199.00
IUUC-Xma-134302	Xiphophorus maculatus	80.08	0.00e+00	723.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence