iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007567

UUCD1 version

UUC-ArT-01357

Ensembl Protein ID

AT2G15580.1

UniProt Accession

Q9ZQF5; Q9ZQF5_ARATH

Genbank Protein ID

AAD17402.2; AAM66032.1; AAY57592.1; ABR46210.1; AEC06419.1; BAH19888.1

Protein Name

AT2G15580 protein; At2g15580; Putative RING-H2 zinc finger protein; RING finger family protein; RING/U-box superfamily protein

Genbank Nucleotide ID

AC006248; AY088497; DQ059106; BT030630; CP002685; AK317204

Gene Name

At2g15580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G15580	AT2G15580.3	AT2G15580.3
AT2G15580	AT2G15580.2	AT2G15580.2
AT2G15580	AT2G15580.1	AT2G15580.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-08	35.8	150	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++fk+g  ++ lpC H fh  Cl  w        ++ +CP+Cr
   Q: 150  CAICLDRFKKGetLVHLPCAHKFHSICLLPW------LDTNVYCPYCR 191
           ********77777445***************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAGMLPGVEC ARRRRFHGGA PPIESSNTAS VAAAAGHVWT RRPSFSLYTT NHESHQAHVS 60
FSERSVRNKS YGEDNDEKLD GAAKEAKQRL NKRLRIPPRT RQNGKDKGNK LEQGKGKPLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGAATGGA AGGAGTATAA GACTTAATTT ATTACGTATC GGATCACAAC AAACATGCAC 60
TTGAATCACA TCCACCTAAC TTCCATCTAG GTGTTTGTTT TTGCAATTAT TCATATAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000673	Aegilops tauschii	52.00	8.00e-13	65.50
IUUC-Atr-003040	Amborella trichopoda	30.46	3.00e-16	76.60
IUUC-Aly-006139	Arabidopsis lyrata	94.39	1.00e-108	384.00
IUUC-Bdi-014038	Brachypodium distachyon	34.56	6.00e-22	96.70
IUUC-Bol-015257	Brassica oleracea	85.20	7.00e-91	325.00
IUUC-Bra-017025	Brassica rapa	85.13	2.00e-90	323.00
IUUC-Gma-043392	Glycine max	33.59	2.00e-13	67.80
IUUC-Hvu-047812	Hordeum vulgare	33.33	7.00e-16	76.30
IUUC-Lpe-051053	Leersia perrieri	27.31	6.00e-13	67.00
IUUC-Mtr-058785	Medicago truncatula	42.93	1.00e-32	131.00
IUUC-Mac-064686	Musa acuminata	37.88	9.00e-28	115.00
IUUC-Oba-075651	Oryza barthii	32.08	1.00e-13	68.90
IUUC-Obr-076821	Oryza brachyantha	44.30	2.00e-12	65.50
IUUC-Ogl-077670	Oryza glaberrima	31.43	8.00e-16	76.30
IUUC-Ogu-078446	Oryza glumaepatula	28.77	6.00e-14	70.50
IUUC-Oin-079883	Oryza indica	32.08	7.00e-14	69.70
IUUC-Olo-080497	Oryza longistaminata	41.67	3.00e-13	67.40
IUUC-Ome-081697	Oryza meridionalis	34.39	1.00e-14	72.40
IUUC-Oni-082580	Oryza nivara	27.59	8.00e-11	59.30
IUUC-Opu-083785	Oryza punctata	33.18	6.00e-15	73.60
IUUC-Oru-084516	Oryza rufipogon	32.08	8.00e-14	70.10
IUUC-Osa-085652	Oryza sativa	30.37	1.00e-15	75.50
IUUC-Ppa-095736	Physcomitrella patens	55.10	3.00e-14	72.40
IUUC-Pop-099358	Populus trichocarpa	57.45	2.00e-13	68.90
IUUC-Ppe-101787	Prunus persica	39.50	3.00e-16	76.60
IUUC-Smo-109484	Selaginella moellendorffii	56.00	2.00e-14	69.30
IUUC-Sit-110008	Setaria italica	27.39	3.00e-12	64.70
IUUC-Sbi-113825	Sorghum bicolor	36.41	3.00e-26	110.00
IUUC-Tca-120960	Theobroma cacao	48.74	7.00e-48	182.00
IUUC-Tae-122845	Triticum aestivum	32.57	3.00e-18	84.30
IUUC-Tur-126628	Triticum urartu	31.69	6.00e-16	75.90
IUUC-Vvi-131648	Vitis vinifera	49.50	2.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence