iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015923

Ensembl Protein ID

Bo4g139680.1

UniProt Accession

A0A0D3C021; A0A0D3C021_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g139680	Bo4g139680.1	Bo4g139680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.10e-16	60.3	60	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           e+p eflCpIs+ lM dPv+++sG++y+r+++      g + +P+   +  + ++++Pnl+l++ i +wc+++s
   Q: 60   EIPTEFLCPISGYLMADPVIVSSGHSYERACVIASKTLGFTPSPLLPNSPpDFSTVIPNLALKSAILSWCDRRS 133
           69******************************887777777777655555155666**************9976 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MEIQRPVIKL MVLHSNHDKS DNLSRREFLP GKSKWRISLS RSPSSSSSSK SNNTSPSKTE 60
IPTEFLCPIS GYLMADPVIV SSGHSYERAC VIASKTLGFT PSPLLPNSPP DFSTVIPNLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATTC AACGACCAGT CATCAAGCTC ATGGTTCTCC ACTCAAACCA CGACAAAAGC 60
GACAACCTTT CCCGACGAGA ATTTCTCCCC GGTAAATCCA AATGGAGAAT CTCTTTATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	44.48	1.00e-66	247.00
IUUC-Aly-005518	Arabidopsis lyrata	84.96	0.00e+00	851.00
IUUC-Ath-006703	Arabidopsis thaliana	83.88	0.00e+00	864.00
IUUC-Bdi-014649	Brachypodium distachyon	36.12	3.00e-68	252.00
IUUC-Bra-016715	Brassica rapa	95.49	0.00e+00	877.00
IUUC-Lpe-050893	Leersia perrieri	37.40	7.00e-57	214.00
IUUC-Mac-064560	Musa acuminata	42.71	6.00e-49	188.00
IUUC-Ppe-101810	Prunus persica	58.35	4.00e-134	471.00
IUUC-Sit-109782	Setaria italica	35.40	3.00e-55	209.00
IUUC-Sly-111131	Solanum lycopersicum	56.78	3.00e-132	464.00
IUUC-Stu-112864	Solanum tuberosum	56.64	6.00e-124	437.00
IUUC-Sbi-113814	Sorghum bicolor	35.77	6.00e-47	181.00
IUUC-Tca-121304	Theobroma cacao	62.82	2.00e-148	518.00
IUUC-Tae-124240	Triticum aestivum	37.16	2.00e-69	256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence