iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050817

Ensembl Protein ID

LPERR06G09400.1

UniProt Accession

A0A0D9WP79; A0A0D9WP79_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR06G09400	LPERR06G09400.1	LPERR06G09400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.50e-20	72.7	222	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           +++ f Cp+++++M dPv+++sG+tydr++Ie+++++         cPvt+ ++++++l  n  l+++i +w+ +n+
   Q: 222  LYDSFFCPLTNKVMVDPVTTESGVTYDRRAIEEHFEKFTDgskpvICPVTKMSMQSKTLRSNVPLKSTIAEWIMRNE 298
           5799*******************************6655555699***************************99886 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MDGGFALEMR SGAQARKASL VESIQAAISE LMPPEAGADA EQEKFMDVGS HLYHAPLVTM 60
EQQRAQNSTI NVMHAMEYLA ANVDLAKDLV MRCSAIAQEL KNDDLLSMTE DLDSVIRNIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGAGGAGG AGGTCGAAGC GGAGGGGGAG GAGAAGCAGC TGCGGCTCGA GTTCTTGAAG 60
TTGAAGGTCT TGGATGCAGG TACGCGGAAG CATCTGAGAT TTTCCAGTTT GCTGAATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002664	Amborella trichopoda	40.40	0.00e+00	654.00
IUUC-Ath-006596	Arabidopsis thaliana	41.96	3.00e-174	605.00
IUUC-Bdi-014572	Brachypodium distachyon	78.59	0.00e+00	1500.00
IUUC-Bol-016179	Brassica oleracea	42.70	0.00e+00	635.00
IUUC-Bra-017617	Brassica rapa	42.58	0.00e+00	631.00
IUUC-Hvu-047800	Hordeum vulgare	77.52	0.00e+00	1506.00
IUUC-Mac-065538	Musa acuminata	46.98	0.00e+00	771.00
IUUC-Oba-075004	Oryza barthii	92.55	0.00e+00	1863.00
IUUC-Obr-076090	Oryza brachyantha	93.46	0.00e+00	1493.00
IUUC-Ogl-077375	Oryza glaberrima	92.55	0.00e+00	1863.00
IUUC-Ogu-078488	Oryza glumaepatula	92.74	0.00e+00	1870.00
IUUC-Oin-079369	Oryza indica	92.95	0.00e+00	1734.00
IUUC-Olo-080901	Oryza longistaminata	93.45	0.00e+00	1590.00
IUUC-Ome-081243	Oryza meridionalis	92.17	0.00e+00	1861.00
IUUC-Oni-082268	Oryza nivara	92.54	0.00e+00	1870.00
IUUC-Opu-083388	Oryza punctata	92.24	0.00e+00	1903.00
IUUC-Oru-084387	Oryza rufipogon	92.55	0.00e+00	1867.00
IUUC-Osa-086255	Oryza sativa	92.78	0.00e+00	1792.00
IUUC-Pop-099123	Populus trichocarpa	41.34	0.00e+00	701.00
IUUC-Ppe-101776	Prunus persica	43.14	0.00e+00	733.00
IUUC-Pgr-103563	Puccinia graminis	30.91	1.00e+00	29.30
IUUC-Sit-110322	Setaria italica	80.15	0.00e+00	1544.00
IUUC-Sly-111047	Solanum lycopersicum	41.04	0.00e+00	735.00
IUUC-Stu-112113	Solanum tuberosum	40.59	0.00e+00	701.00
IUUC-Sbi-113818	Sorghum bicolor	78.13	0.00e+00	1467.00
IUUC-Tca-121365	Theobroma cacao	44.30	0.00e+00	786.00
IUUC-Tae-123677	Triticum aestivum	77.33	0.00e+00	1481.00
IUUC-Tur-126161	Triticum urartu	77.24	0.00e+00	1458.00
IUUC-Vvi-131502	Vitis vinifera	46.21	0.00e+00	679.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence