iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099828

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_575328; POPTR_0015s10540g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s10540	POPTR_0015s10540.1	POPTR_0015s10540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-19	70.9	129	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H+ s  cl f +d  ll+sGs Dg++ vW++ +
   Q: 129  HSRSLKCLIFsNDdSLLISGSEDGVVCVWSMVS 161
           999********7779**************9865 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGKGNGSDEV LVVCSDRNMG TGIAMWDMET GDRIMHIPTC ASPLHGLLCL RDQFLVASQV 60
NKHGSVGGGA IFTWSLNKPQ QPLRSYPLEA IGPLGCTKDG LFLAGGSPSG NVYLWEVAGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAAAGG GAAATGGAAG TGATGAGGTT TTGGTGGTGT GTAGTGATAG GAATATGGGG 60
ACAGGGATAG CAATGTGGGA TATGGAAACA GGAGATCGTA TTATGCATAT ACCAACTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0015s10540g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002808	Amborella trichopoda	52.26	3.00e-93	335.00
IUUC-Apl-004023	Anas platyrhynchos	28.57	4.00e-18	85.10
IUUC-Gma-043120	Glycine max	49.09	6.00e-97	347.00
IUUC-Mtr-057865	Medicago truncatula	56.36	3.00e-121	428.00
IUUC-Mac-065554	Musa acuminata	51.84	1.00e-103	369.00
IUUC-Obr-076097	Oryza brachyantha	37.85	9.00e-58	217.00
IUUC-Ppe-101442	Prunus persica	69.23	7.00e-121	426.00
IUUC-Sja-107783	Schizosaccharomyces japonicus	31.75	4.00e-30	125.00
IUUC-Tca-121285	Theobroma cacao	55.33	9.00e-140	489.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence