iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121439

Ensembl Protein ID

EOY03802

UniProt Accession

A0A061EHB8; A0A061EHB8_THECC

Genbank Protein ID

EOY03802.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001882

Gene Name

TCM_018986

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_018986	EOY03802	EOY03802

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.10e-08	33.5	175	215

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cle++  +++ +v+ C H+fh+ C++ w        ++ +CP+C
   Q: 175  CPTCLEEYtpENPKIVTKCSHHFHLGCIYEW------MERSENCPVC 215
           ******998777566799*************......999999**** PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGSVCCCLHA EDFEDYVNPN SNVYRNCMCL SCFVQNFLHV YTTLFRRGEV HSVPSSIQGT 60
ASMNSSASLD NSLSDMYRSP PRPLPYDADT RYFILQRDGL VSRREKGSSH SQEESEPLRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCAATAAAA TTTCTCTCTC TTTACACTTC TCTCAGCTCA ATTTCCGTCA AGGTAACTAT 60
TTTATTTTTT TTTATCACTT TAAGATGTTT TAATTGATTT CTTTTTATTG GGATTATCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

tcc:TCM_018986

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000479	Aegilops tauschii	51.60	1.00e-43	168.00
IUUC-Aly-005799	Arabidopsis lyrata	61.64	2.00e-69	254.00
IUUC-Ath-007679	Arabidopsis thaliana	59.65	9.00e-68	248.00
IUUC-Bdi-014798	Brachypodium distachyon	49.12	3.00e-52	197.00
IUUC-Bol-016572	Brassica oleracea	59.31	6.00e-74	269.00
IUUC-Bra-017888	Brassica rapa	59.11	9.00e-71	259.00
IUUC-Cme-027114	Cyanidioschyzon merolae	56.45	1.00e-17	83.20
IUUC-Gma-043590	Glycine max	79.20	5.00e-106	375.00
IUUC-Hvu-047810	Hordeum vulgare	48.40	2.00e-52	197.00
IUUC-Lpe-051120	Leersia perrieri	53.73	6.00e-51	194.00
IUUC-Mtr-058320	Medicago truncatula	73.57	3.00e-93	333.00
IUUC-Mac-064735	Musa acuminata	54.42	5.00e-65	239.00
IUUC-Oba-075895	Oryza barthii	51.98	4.00e-56	209.00
IUUC-Obr-076815	Oryza brachyantha	52.42	6.00e-57	213.00
IUUC-Ogl-077082	Oryza glaberrima	51.98	4.00e-56	209.00
IUUC-Ogu-078357	Oryza glumaepatula	55.50	1.00e-51	194.00
IUUC-Olo-080533	Oryza longistaminata	54.10	1.00e-44	173.00
IUUC-Oni-082343	Oryza nivara	50.22	9.00e-55	206.00
IUUC-Opu-083596	Oryza punctata	51.36	4.00e-52	196.00
IUUC-Oru-084659	Oryza rufipogon	50.91	2.00e-54	204.00
IUUC-Osa-085679	Oryza sativa	51.98	2.00e-57	214.00
IUUC-Ppa-095272	Physcomitrella patens	34.84	1.00e-35	142.00
IUUC-Pop-099578	Populus trichocarpa	80.97	1.00e-98	351.00
IUUC-Ppe-101573	Prunus persica	81.06	6.00e-104	369.00
IUUC-Sit-110241	Setaria italica	49.12	9.00e-50	188.00
IUUC-Sly-111198	Solanum lycopersicum	73.57	1.00e-83	301.00
IUUC-Stu-112362	Solanum tuberosum	42.33	4.00e-34	137.00
IUUC-Sbi-114816	Sorghum bicolor	47.58	2.00e-47	181.00
IUUC-Tae-124855	Triticum aestivum	50.22	7.00e-55	206.00
IUUC-Vvi-130841	Vitis vinifera	79.11	7.00e-96	342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence