iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076550

Ensembl Protein ID

OB05G27730.1

UniProt Accession

J3M849; J3M849_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB05G27730	OB05G27730.1	OB05G27730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.50e-32	110.6	267	339

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +f+CpIsl+lMrdPvv++sG+tydr sI +w+ sg++tcP+t+q lt+ +lvPn++l++li++wc en++
   Q: 267  PPMDFRCPISLDLMRDPVVSASGQTYDRDSITRWFGSGKSTCPKTGQVLTSLELVPNKALKNLISRWCRENGV 339
           6889******************************************************************986 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MANARNAAAA PSSSSYSSSA SDGEILRSLH RLARDLAGAE APAPFLETVF AAVSRRAKLL 60
AAVFDDLLRC GRLPRSASLC LREVLLVLQR FKAVVADCSA RSRMRLLLQA DEVAARVREL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAACG CGAGGAACGC GGCTGCTGCG CCGTCGTCGT CTTCGTACTC CTCGTCGGCG 60
TCCGACGGGG AGATTCTTCG GTCGTTGCAC CGTTTGGCGA GGGATTTGGC TGGGGCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002566	Amborella trichopoda	43.38	9.00e-97	347.00
IUUC-Aly-005828	Arabidopsis lyrata	42.71	1.00e-114	405.00
IUUC-Ath-007101	Arabidopsis thaliana	42.92	3.00e-113	401.00
IUUC-Bdi-014870	Brachypodium distachyon	84.57	0.00e+00	748.00
IUUC-Bol-015511	Brassica oleracea	42.68	6.00e-112	397.00
IUUC-Bra-017197	Brassica rapa	42.83	8.00e-112	396.00
IUUC-Hvu-047557	Hordeum vulgare	84.60	0.00e+00	687.00
IUUC-Lpe-051445	Leersia perrieri	85.46	0.00e+00	813.00
IUUC-Mtr-058241	Medicago truncatula	42.90	1.00e-104	373.00
IUUC-Mac-065033	Musa acuminata	54.20	3.00e-126	444.00
IUUC-Oba-075591	Oryza barthii	83.26	0.00e+00	778.00
IUUC-Ogl-077709	Oryza glaberrima	83.26	0.00e+00	778.00
IUUC-Ogu-078626	Oryza glumaepatula	83.11	0.00e+00	778.00
IUUC-Oin-080113	Oryza indica	83.11	0.00e+00	777.00
IUUC-Olo-080301	Oryza longistaminata	87.42	2.00e-178	618.00
IUUC-Ome-081924	Oryza meridionalis	87.63	0.00e+00	814.00
IUUC-Oni-082284	Oryza nivara	83.26	0.00e+00	778.00
IUUC-Opu-083971	Oryza punctata	84.58	0.00e+00	761.00
IUUC-Oru-084898	Oryza rufipogon	83.71	0.00e+00	835.00
IUUC-Pop-099292	Populus trichocarpa	44.22	2.00e-127	449.00
IUUC-Ppe-101643	Prunus persica	43.84	2.00e-131	461.00
IUUC-Sly-111346	Solanum lycopersicum	44.46	3.00e-121	428.00
IUUC-Stu-112435	Solanum tuberosum	44.70	5.00e-123	434.00
IUUC-Tca-121203	Theobroma cacao	45.41	3.00e-129	454.00
IUUC-Tae-124205	Triticum aestivum	85.18	7.00e-178	616.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence