iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-064826

Ensembl Protein ID

GSMUA_Achr4P05650_001

UniProt Accession

M0SLD2; M0SLD2_MUSAM

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr4G05650_001	GSMUA_Achr4T05650_001	GSMUA_Achr4P05650_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-16	61.2	454	490
UBD/Beta-Prp	1.90e-48	166.0	341	623

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrtgv 34
           H ++v+++af  ++    +++++dD+tikvWD +tg 
   Q: 454  HVGGVNDIAFshPTksLSIITCGDDKTIKVWDATTGQ 490
           99********985433459*************99985 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls..............tgkcvhtlk.....ghedsvlslsfspsgdklvs 111
           ++r+ls+ +  + +++f+p  + il+ g + + i +w++                g+c+++l+         sv  + +sp+g+ + +
   Q: 341  VVRTLSQGS-NIMSLDFHPVHQtILLVGTNVGDIAIWEVGsrerivhrtfkvweIGTCTVSLQaalmkDAAISVNRCLWSPDGSIFGI 427
           455555555.566666666555444444444555555444334444444444444445555543332233333344566666666666 PP
   S: 112  Gshdrtirvwdletgqclee...tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngk 193
           + +  +++++  + + +l++   +++   gv+ ++ +hp++   ++++++D+t+++Wd  tg+  ++++g h+ +vys+   ++++ +
   Q: 428  AFSKHIVQIYAFNINGELRQpveIDAHVGGVNDIAFSHPTKsLSIITCGDDKTIKVWDATTGQKQYKFEG-HDAPVYSVCphYKESIQ 514
           666666666666666666659999999999999999*****899*************************9.********97666666* PP
   S: 194  elvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs..sDgsiri..Wdlrsgdllktlqlhnssvisvavlsfgd 277
           ++ s + dg++k w +      + + +  ++ + ++ s +++rl s++  +Dg   +  W+ + g + +t+++ ++++  v  ++ ++
   Q: 515  FIFSTAIDGKIKAWLYDCLGSRVDYDAPGRWCTTMAYSADGTRLFSCGtsKDGESHLveWNETEGAIKRTYSGFRKRSLGVVQFDTTK 602
           **************9984445899**********************9888888877778****************999999888**** PP
   S: 278  nvlvlgsedskvniwklkkne 298
           n +++++++  +++w++++++
   Q: 603  NRFLAAGDEFMIKFWDMDNIN 623
           ****************99875 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKH FEDLVQAGEW DEVERYLGGF 60
TKVEDNRYSM KIFFEIRKQK YLEALDRHDR AKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCTT TGAGCAGGGA ATTGGTTTTC CTGATATTGC AGTTCCTGGA CGAGGAAAAG 60
TTCAAGGAAA CCGTTCATAA GTAAGCTGAA TTATCTATCC TCAGCCCTGT CATTTAGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence