iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131079

Ensembl Protein ID

VIT_09s0002g08370.t01

UniProt Accession

D7TZB7; D7TZB7_VITVI

Genbank Protein ID

CBI36431.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596494

Gene Name

VIT_09s0002g08370

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_09s0002g08370	VIT_09s0002g08370.t01	VIT_09s0002g08370.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-21	74.3	457	492
UBD/Beta-Prp	6.70e-45	154.1	415	758

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H+++v++laf  ++  l +++++dD+tikvWD + g
   Q: 457  HAGGVNDLAFshPNkQLcVITCGDDKTIKVWDATNG 492
           99********99764334699***********8876 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghe 94
            ++ + +spd+sl+ +++ ++ +++++++ g+ +r+      h ++v+++ fs+  k    +t+++D+tikvwd  +g+  +t++ghe
   Q: 415  SVNRIIWSPDGSLFGVAYSRHIVQIYSYHGGDDVRQHleiDAHAGGVNDLAFSHPNKqlCVITCGDDKTIKVWDATNGTKQYTFEGHE 502
           5667889************************99654323389***********99888999*************************** PP
   S: 95   dsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtlt 176
           d v+s+  +   + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg  l+s+++    D+ +  W+ + g + rt +
   Q: 503  DAVYSVCPHYkeNIQFIFSTALDGKIKAWLYDNLGSRVDYDAPG-RWCTTMAYSADGTRLFSCGTskdgDSYIVEWNESEGAVKRTYQ 589
           *****855544388***************999988777566665.5999999***9*999998764555778888999********** PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght......dnvksvrfspnderlvsgssDgsiriW.dlrsgdll 257
           g  ++s   ++fd ++++++++++d ++k+wd+ + + + +l +        +   ++rf +++++l++ + ++si+i  +++   ll
   Q: 590  GFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNIQLLTILDAEGglpglpA-SPRIRFNKDGTLLAVSANENSIKILaNSDGLRLL 676
           **********************************9999999999886666633.34599*******************7766666666 PP
   S: 258  ktlqlhn....................................ssvisvavlsfgdnvl......vlgsedskvniwklkkn 297
           +t+ +                                       sv+++a+++ + +++      ++ + ++k +iwkl+++
   Q: 677  RTFDNLSydasrasesvtkpainsisaaaaaaaatsagladrgASVVAIAGMNGDARNMgdvkprLAEETNDKSKIWKLTEI 758
           6666655666666666666666555555555555555555555555555554444444477777655555778888888876 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHSGNW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFATFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTGTCTTT ATTTTGTTTG TTTTGCGCAG ATCTAGTGTT ATTTTTTGTG AAATTTGTTG 60
ATTTGGATAC CAACAGGGAG CCAAAACGAT GTCGTCTCTC AGTAGAGAGC TTGTGTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

KEGG

vvi:100248092

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	79.22	0.00e+00	1816.00
IUUC-Aly-005472	Arabidopsis lyrata	82.94	0.00e+00	1861.00
IUUC-Ath-007021	Arabidopsis thaliana	84.06	0.00e+00	1909.00
IUUC-Bdi-014914	Brachypodium distachyon	78.93	0.00e+00	1783.00
IUUC-Bol-015359	Brassica oleracea	83.19	0.00e+00	1874.00
IUUC-Bra-016893	Brassica rapa	83.27	0.00e+00	1872.00
IUUC-Gma-044036	Glycine max	88.53	0.00e+00	1986.00
IUUC-Hvu-047688	Hordeum vulgare	80.71	0.00e+00	1725.00
IUUC-Lpe-051514	Leersia perrieri	77.76	0.00e+00	1699.00
IUUC-Mtr-058037	Medicago truncatula	86.71	0.00e+00	1941.00
IUUC-Mac-065382	Musa acuminata	80.17	0.00e+00	1822.00
IUUC-Oba-075912	Oryza barthii	80.73	0.00e+00	1791.00
IUUC-Obr-076921	Oryza brachyantha	79.97	0.00e+00	1799.00
IUUC-Ogl-077334	Oryza glaberrima	80.51	0.00e+00	1803.00
IUUC-Ogu-078494	Oryza glumaepatula	80.51	0.00e+00	1803.00
IUUC-Oin-079720	Oryza indica	78.83	0.00e+00	1793.00
IUUC-Olo-081034	Oryza longistaminata	77.68	0.00e+00	1777.00
IUUC-Ome-081778	Oryza meridionalis	80.42	0.00e+00	1803.00
IUUC-Oni-082412	Oryza nivara	80.73	0.00e+00	1791.00
IUUC-Opu-083406	Oryza punctata	78.82	0.00e+00	1736.00
IUUC-Oru-084328	Oryza rufipogon	80.51	0.00e+00	1792.00
IUUC-Osa-085765	Oryza sativa	80.51	0.00e+00	1803.00
IUUC-Pop-098876	Populus trichocarpa	86.07	0.00e+00	1974.00
IUUC-Ppe-101370	Prunus persica	90.47	0.00e+00	2065.00
IUUC-Sit-110288	Setaria italica	79.20	0.00e+00	1771.00
IUUC-Sly-111739	Solanum lycopersicum	85.00	0.00e+00	1952.00
IUUC-Sbi-114078	Sorghum bicolor	79.46	0.00e+00	1776.00
IUUC-Tca-121628	Theobroma cacao	88.05	0.00e+00	1980.00
IUUC-Tae-125600	Triticum aestivum	80.07	0.00e+00	1822.00
IUUC-Tur-126412	Triticum urartu	78.76	0.00e+00	1813.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence