iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095845

Ensembl Protein ID

PP1S99_260V6.1

UniProt Accession

A9SP06; A9SP06_PHYPA

Genbank Protein ID

EDQ67164.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544988

Gene Name

PHYPADRAFT_234967

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S99_260V6	PP1S99_260V6.1	PP1S99_260V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-20	72.1	456	492
UBD/Beta-Prp	9.00e-43	147.3	353	533

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgv 34
           H ++v++laf  ++  l +++++dD+tikvWD  tg+
   Q: 456  HVGGVNDLAFshPNkQLcVITCGDDKTIKVWDAATGR 492
           999*******99764334699***********99887 PP

UBD/Beta-Prp

   S: 97   vlslsfsp.sgdklvsGshdrtirvwdletgqclee..................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
           v+s++f+p + + l++G+++  i +w++ ++  l +                  + +    +vn +v++pdg ll  ++   +v ++  + g+ l
   Q: 353  VMSMDFHPiQLSILLVGTNVGDIGIWEVGSRDRLAQrtfkvwditaasmpmqaaLVKDPAVSVNRTVWNPDGTLLGVAFSKHIVHIYAYNGGSDL 447
           89******555*****************************************985555555899999**************************** PP
   S: 173  rtl..tgghtdsvyslsfdsng..kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs..pnderlvsgssDgsiriW..d 250
           r+     +h + v+ l+f++     +++++++d+t+k+wd  tg+  +t++gh+++v+sv  +  +  +++ s++ Dg i+ W  d
   Q: 448  RQHleIDAHVGGVNDLAFSHPNkqLCVITCGDDKTIKVWDAATGRKQYTFEGHEAPVYSVCPHhkESIQFIFSTAIDGKIKAWlyD 533
           99988556*********88755446789********************************9995566689*************555 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDQVQSGEW EEVERYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKQDR AKAVDILVKD LKVFSSFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCCT TAAGTAGGGA ACTCGTGTTC CTGATCTTGC AGTTCCTTGA TGAGGAAAAG 60
TTCAAGGAAA CAGTGCATAA GTAAGTGACT TCTCCTCATG TGAGTGGCTT TGACCACAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

ppp:PHYPADRAFT_234967

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015359	Brassica oleracea	67.85	0.00e+00	1539.00
IUUC-Bra-016893	Brassica rapa	67.85	0.00e+00	1541.00
IUUC-Mac-065511	Musa acuminata	71.30	0.00e+00	1601.00
IUUC-Smo-109119	Selaginella moellendorffii	72.81	0.00e+00	1612.00
IUUC-Sly-111268	Solanum lycopersicum	69.77	0.00e+00	1623.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence