iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079548

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000126

Gene Name

OsI_04551

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA000435	BGIOSGA000435-TA	BGIOSGA000435-PA

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	24486490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	4.40e-31	107.8	7	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqpl.teedlvPnltlrrliqawceen 72
           evp++f+CpIsl+lMrdPv+lp+Gi+ydr++I++wla  g   tcPvtrqpl +  +l+Pn+tlrrliq+w ++ 
   Q: 7    EVPSYFVCPISLQLMRDPVTLPTGISYDRAAIARWLAAPGArrTCPVTRQPLeHGLELTPNHTLRRLIQSWAASV 81
           69**********************************7666667*********666789*************9876 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MASAAAEVPS YFVCPISLQL MRDPVTLPTG ISYDRAAIAR WLAAPGARRT CPVTRQPLEH 60
GLELTPNHTL RRLIQSWAAS VSPGSAVDEE VAALRPVSSD KVASLLSDAA AAQVGALRRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGCG CTGCGGCCGA GGTGCCGTCC TACTTCGTCT GCCCGATCTC GCTGCAGCTC 60
ATGCGCGACC CCGTCACGCT CCCTACGGGG ATCTCGTACG ACCGCGCCGC GATCGCGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014995	Brachypodium distachyon	81.27	9.00e-158	548.00
IUUC-Lpe-051637	Leersia perrieri	88.53	8.00e-176	608.00
IUUC-Mac-065098	Musa acuminata	48.74	4.00e-92	330.00
IUUC-Oba-075228	Oryza barthii	96.29	0.00e+00	657.00
IUUC-Ogl-077014	Oryza glaberrima	99.75	0.00e+00	691.00
IUUC-Ogu-078714	Oryza glumaepatula	99.26	0.00e+00	706.00
IUUC-Ome-081970	Oryza meridionalis	98.76	0.00e+00	684.00
IUUC-Oni-082125	Oryza nivara	100.00	0.00e+00	693.00
IUUC-Opu-083723	Oryza punctata	96.29	0.00e+00	637.00
IUUC-Oru-084245	Oryza rufipogon	99.50	0.00e+00	719.00
IUUC-Osa-086092	Oryza sativa	99.75	0.00e+00	682.00
IUUC-Sit-110520	Setaria italica	81.37	3.00e-149	520.00
IUUC-Sbi-114514	Sorghum bicolor	78.92	1.00e-152	531.00
IUUC-Tae-124162	Triticum aestivum	85.93	7.00e-170	589.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence