iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__2246__AT3G58030.2	fgenesh2_kg.5__2246__AT3G58030.2	fgenesh2_kg.5__2246__AT3G58030.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.00e-07	30.1	136	191
E3 activity/RING/RING	1.00e-06	29.8	139	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl.asggktcPvtrqplteedlvPnl 59
           +f C I l+l ++Pv +++G+ y   ++ +wl  s+ k+cPv++ ++t+++++P +
   Q: 136  FFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLqISDAKECPVCKGEVTSKTVTPIY 191
           79******************************5455558**************975 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  k+ p+++ CgH+++  Cl++w     + s +  CP+C+
   Q: 139  CNICLDLSKE-PVLTCCGHLYCWPCLYQW----LQISDAKECPVCK 179
           99******99.999***************....8899999*****7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGEELADTMN LDLNLGPGPE SDLQPAPNET VNLADWTNDP PDRSSEAVTR IRTRHRTRFR 60
QLNLPIPVLS ETHTMAIELN QLMGSSVNGA ALQTGEGSER GNEDLKMCEN GDGALGDGVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTTCCAT GGCGTTGTCG GAGTTTCAGC TAGCTCTGAG CTTGTTGGTC TTGTTGTTCT 60
AGCTGATTTG ATCAACCCCA TGGTCTTACA CGACCTAATC CAAACTCCAG GTCGTTGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_486254

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000500	Aegilops tauschii	50.00	7.00e-32	130.00
IUUC-Atr-002855	Amborella trichopoda	56.64	4.00e-31	128.00
IUUC-Ath-007143	Arabidopsis thaliana	97.27	0.00e+00	763.00
IUUC-Ago-007781	Ashbya gossypii	43.75	2.00e-08	52.80
IUUC-Bdi-014417	Brachypodium distachyon	51.96	1.00e-31	130.00
IUUC-Bol-015310	Brassica oleracea	92.02	0.00e+00	709.00
IUUC-Bra-017049	Brassica rapa	92.02	0.00e+00	708.00
IUUC-Gma-042913	Glycine max	52.18	2.00e-101	362.00
IUUC-Hvu-047679	Hordeum vulgare	49.14	7.00e-32	130.00
IUUC-Lpe-051486	Leersia perrieri	50.43	1.00e-32	134.00
IUUC-Mtr-057874	Medicago truncatula	50.95	8.00e-101	360.00
IUUC-Mac-064953	Musa acuminata	52.25	1.00e-31	130.00
IUUC-Oba-075745	Oryza barthii	52.94	7.00e-31	127.00
IUUC-Obr-076527	Oryza brachyantha	47.15	3.00e-31	128.00
IUUC-Ogl-077431	Oryza glaberrima	52.94	7.00e-31	127.00
IUUC-Ogu-078666	Oryza glumaepatula	52.94	7.00e-31	127.00
IUUC-Oin-079645	Oryza indica	52.94	7.00e-31	127.00
IUUC-Olo-080972	Oryza longistaminata	52.94	7.00e-31	127.00
IUUC-Ome-081574	Oryza meridionalis	47.15	1.00e-30	127.00
IUUC-Oni-082132	Oryza nivara	52.94	7.00e-31	127.00
IUUC-Opu-083673	Oryza punctata	52.94	6.00e-30	126.00
IUUC-Oru-084822	Oryza rufipogon	52.94	8.00e-31	127.00
IUUC-Osa-085696	Oryza sativa	52.94	7.00e-31	127.00
IUUC-Olu-087623	Ostreococcus lucimarinus	46.58	5.00e-19	86.70
IUUC-Ppa-095532	Physcomitrella patens	60.87	1.00e-24	107.00
IUUC-Pop-099819	Populus trichocarpa	53.81	8.00e-110	389.00
IUUC-Ppe-101193	Prunus persica	57.84	6.00e-92	330.00
IUUC-Sit-110715	Setaria italica	49.59	8.00e-32	131.00
IUUC-Sly-111147	Solanum lycopersicum	49.89	1.00e-84	306.00
IUUC-Stu-112419	Solanum tuberosum	49.44	2.00e-87	315.00
IUUC-Sbi-114164	Sorghum bicolor	46.10	5.00e-32	131.00
IUUC-Tca-121427	Theobroma cacao	54.43	3.00e-98	351.00
IUUC-Tae-125026	Triticum aestivum	48.09	1.00e-32	134.00
IUUC-Tur-126535	Triticum urartu	51.35	1.00e-31	130.00
IUUC-Vvi-131195	Vitis vinifera	47.69	5.00e-83	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence