iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042700

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000842

Gene Name

GLYMA_09G253400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA09G38870	GLYMA09G38870.2	GLYMA09G38870.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-07	32.8	108	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC ed++d   ++ +p C H fh+dC+ +w       + + +CP+Cr
   Q: 108  CSICIEDYEDSemLRMMPqCRHYFHKDCVDAW------LKVKTSCPICR 150
           ********88444666669*************......999*******8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSSSPSPSVS ILSPTTLTST SNDLDLFTKL FLLFIFLCLF LRVCYVYISM RCNQQDNENI 60
LSHHGDDNND NQNHLTGLPI NVINSYQTFT YSSKTNNLET IYDHDTTCSI CIEDYEDSEM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCAT CTCCCTCTCC CTCCGTCTCC ATTTTGTCAC CCACGACCCT CACCTCCACA 60
AGCAATGATC TAGACTTATT CACCAAGTTG TTCCTTTTAT TCATCTTTTT GTGTCTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002663	Amborella trichopoda	47.06	2.00e-20	92.00
IUUC-Bra-017359	Brassica rapa	50.59	3.00e-20	91.70
IUUC-Hvu-047604	Hordeum vulgare	47.37	1.00e-17	83.20
IUUC-Mtr-058250	Medicago truncatula	52.50	4.00e-30	124.00
IUUC-Mac-064920	Musa acuminata	47.14	8.00e-17	80.10
IUUC-Obr-076398	Oryza brachyantha	54.24	3.00e-16	78.20
IUUC-Opu-084024	Oryza punctata	48.05	8.00e-18	83.20
IUUC-Pop-099567	Populus trichocarpa	50.00	6.00e-23	100.00
IUUC-Sit-110209	Setaria italica	45.57	2.00e-18	85.50
IUUC-Sly-111478	Solanum lycopersicum	48.96	3.00e-20	91.70
IUUC-Stu-112259	Solanum tuberosum	48.94	6.00e-23	100.00
IUUC-Sbi-114762	Sorghum bicolor	46.75	1.00e-18	86.30
IUUC-Sre-114942	Sporisorium reilianum	52.17	3.00e-11	64.30
IUUC-Tae-125019	Triticum aestivum	45.45	2.00e-17	82.00
IUUC-Tur-126402	Triticum urartu	45.45	2.00e-17	82.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence