iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114762

UUCD1 version

UUC-SoB-00577

Ensembl Protein ID

Sb03g033910.1

UniProt Accession

A0A194YS03; A0A194YS03_SORBI

Genbank Protein ID

KXG31014.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G283400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g033910	Sb03g033910.1	Sb03g033910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	36.3	122	164

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  ++v+p C H fh  Cl +w       +++++CP+Cr
   Q: 122  CSICLSEYRDGemLRVMPeCRHGFHVACLDAW------LRRSASCPVCR 164
           ********8887799999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSLLSSLSSL GLGYSIAIAL GFLVLLASLL LAFYFCFGRG GGGGGDYWAG EAVTTASSSG 60
HLSITVPRVL FVAEGSESPD DAAYSSASAA AACSPVGLDA AAIASYPKVA FSSRAAEADA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCCTCC TCTCCTCGCT CTCCAGCCTG GGCCTCGGCT ACTCCATCGC CATCGCGCTC 60
GGCTTCCTCG TCCTGCTCGC CTCCCTCCTG CTGGCTTTCT ACTTCTGCTT CGGCCGTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000942	Aegilops tauschii	90.91	2.00e-29	119.00
IUUC-Atr-002663	Amborella trichopoda	54.90	1.00e-28	118.00
IUUC-Bdi-015029	Brachypodium distachyon	75.40	1.00e-40	158.00
IUUC-Bol-015802	Brassica oleracea	47.94	3.00e-32	130.00
IUUC-Bra-017359	Brassica rapa	44.78	2.00e-29	120.00
IUUC-Gma-042700	Glycine max	45.12	3.00e-19	86.70
IUUC-Hvu-047604	Hordeum vulgare	73.80	2.00e-46	177.00
IUUC-Lpe-050991	Leersia perrieri	73.53	5.00e-52	196.00
IUUC-Mtr-058115	Medicago truncatula	53.33	3.00e-19	88.60
IUUC-Mac-064920	Musa acuminata	70.53	7.00e-23	99.40
IUUC-Oba-075352	Oryza barthii	81.08	8.00e-48	182.00
IUUC-Obr-076398	Oryza brachyantha	76.63	5.00e-44	169.00
IUUC-Ogl-077080	Oryza glaberrima	81.08	8.00e-48	182.00
IUUC-Ogu-077991	Oryza glumaepatula	81.08	8.00e-48	182.00
IUUC-Oin-080020	Oryza indica	80.54	2.00e-47	181.00
IUUC-Olo-080906	Oryza longistaminata	81.08	8.00e-48	182.00
IUUC-Ome-081299	Oryza meridionalis	81.08	8.00e-48	182.00
IUUC-Oni-082889	Oryza nivara	81.08	1.00e-47	181.00
IUUC-Opu-084024	Oryza punctata	81.62	1.00e-48	184.00
IUUC-Oru-084432	Oryza rufipogon	81.08	1.00e-47	181.00
IUUC-Osa-085873	Oryza sativa	81.08	1.00e-47	181.00
IUUC-Ppa-095252	Physcomitrella patens	55.88	1.00e-31	128.00
IUUC-Pop-099130	Populus trichocarpa	52.86	4.00e-29	120.00
IUUC-Smo-109669	Selaginella moellendorffii	54.17	3.00e-31	126.00
IUUC-Sit-110209	Setaria italica	92.05	2.00e-60	224.00
IUUC-Sly-111309	Solanum lycopersicum	53.68	3.00e-30	124.00
IUUC-Stu-112524	Solanum tuberosum	53.28	3.00e-30	124.00
IUUC-Tae-125019	Triticum aestivum	78.26	8.00e-47	178.00
IUUC-Tur-126402	Triticum urartu	79.12	6.00e-47	179.00
IUUC-Vvi-130869	Vitis vinifera	50.38	5.00e-27	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence